RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KLHL32Q96NJ5 620 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SMOC2Q9H3U7 446 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SIX2Q9NPC8 291 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SLC27A6Q9Y2P4 619 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 MYH6P13533 1939 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 TULP2O00295 520 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 DGKIO75912 1065 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 TPBGLP0DKB5 382 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 PCNAP12004 261 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 DMC1Q14565 340 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 CRY1Q16526 586 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 FBXL22Q6P050 247 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 KLHL35Q6PF15 583 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 HEXDCQ8WVB3 486 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 PSMG2Q969U7 264 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 AP2M1Q96CW1 435 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 IL12RB2Q99665 862 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SDCBP2Q9H190 292 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 CDC42EP4Q9H3Q1 356 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 KCTD5Q9NXV2 234 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 FPGTO14772 594 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 LAMTOR5O43504 91 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 ITGAVP06756 1048 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 PBX1P40424 430 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 GBE1Q04446 702 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 ILF3Q12906 894 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 USP39Q53GS9 565 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SRLQ86TD4 932 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 ARMC2Q8NEN0 867 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SGSM3Q96HU1 749 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 FZD10Q9ULW2 581 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 TBC1D30Q9Y2I9 924 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 H0YGN5 161 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 MEFVO15553 781 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 CCNT2O60583 730 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 NDST3O95803 873 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 CHRNB2P17787 502 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 RPL22P35268 128 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 IL2P60568 153 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 IFT88Q13099 833 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 MAPRE2Q15555 327 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 FAM26DQ5JW98 314 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 GRTP1Q5TC63 336 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 HGSNATQ68CP4 663 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 LHX8Q68G74 356 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 ANO7Q6IWH7 933 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SETD3Q86TU7 594 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 MRPL43Q8N983 215 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 LZICQ8WZA0 190 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 NTAN1Q96AB6 310 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 VCX3BQ9H321 246 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 ELOVL6Q9H5J4 265 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 CYP4F12Q9HCS2 524 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SPATA6Q9NWH7 488 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-202ENST00000306042 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
PTPRE-202ENST00000306042 SYNDIG1LA6NDD5 238 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CDK14O94921 469 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 PCCBP05166 539 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 PROZP22891 400 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ABCE1P61221 599 aaKnown RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CARD16Q5EG05 197 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 HFE2Q6ZVN8 426 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CYB5D2Q8WUJ1 264 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 HAUS8Q9BT25 410 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ARL15Q9NXU5 204 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CA14Q9ULX7 337 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 EFR3BQ9Y2G0 817 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ILVBLA1L0T0 632 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 H3BM21 787 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 INSIG1O15503 277 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 BAG2O95816 211 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CFHP08603 1231 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ATXN1P54253 815 aaKnown RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 BTKQ06187 659 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 HNRNPDQ14103 355 aaKnown RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 TAF11Q15544 211 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 POTEHQ6S545 545 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 SERPINB12Q96P63 405 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CPNE1Q99829 537 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 WWP1Q9H0M0 922 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 NMRAL1Q9HBL8 299 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CAPN10Q9HC96 672 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 C5orf60A6NFR6 353 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 BTN3A1O00481 513 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 MATN3O15232 486 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 COCHO43405 550 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 RASGRP1O95267 797 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ETS1P14921 441 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CRABP2P29373 138 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CYP2A13Q16696 494 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms