RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 CRLF3Q8IUI8 442 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 KLHDC8BQ8IXV7 354 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 GBP7Q8N8V2 638 aaPredicted RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 SH3RF2Q8TEC5 729 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 TRIM43Q96BQ3 446 aaPredicted RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 SGF29Q96ES7 293 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 PPP1R36Q96LQ0 422 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 ZNF558Q96NG5 402 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 TASP1Q9H6P5 420 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 TRPM5Q9NZQ8 1165 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 AFF4Q9UHB7 1163 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 BAIAP2L1Q9UHR4 511 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 ARL5AQ9Y689 179 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 DOCK4Q8N1I0 1966 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 CBX4O00257 560 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SNNO75324 88 aaPredicted RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 PRSS56P0CW18 603 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 CPA3P15088 417 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 GJA1P17302 382 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 ZXDBP98169 803 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 RING1Q06587 406 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SNX30Q5VWJ9 437 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 FAM219BQ5XKK7 198 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 DNAJB7Q7Z6W7 309 aaPredicted RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 UTP4Q969X6 686 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 ELMO2Q96JJ3 720 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SCYL1Q96KG9 808 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 OMDQ99983 421 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 TREX1Q9NSU2 369 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 AGO1Q9UL18 857 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 RUVBL2Q9Y230 463 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 HBS1LQ9Y450 684 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 NRG2O14511 850 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 KLF11O14901 512 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 ZNF189O75820 626 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 CLTBP09497 229 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 BMP1P13497 986 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 HOXD9P28356 352 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 SLC11A2P49281 568 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 SCNN1BP51168 640 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 ALDH18A1P54886 795 aaKnown RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 GNA12Q03113 381 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 USP4Q13107 963 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 CTC1Q2NKJ3 1217 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 NEPROQ6NW34 567 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 POTEHQ6S545 545 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 ASRGL1Q7L266 308 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 SLC39A11Q8N1S5 342 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 C2orf15Q8WU43 125 aaKnown RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 HDAC10Q969S8 669 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 RILPQ96NA2 401 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 CD248Q9HCU0 757 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 TLK1Q9UKI8 766 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 FNDC3AQ9Y2H6 1198 aaKnown RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 BACE2Q9Y5Z0 518 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 FAM95CA0A1B0GW59 222 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 H3BNC9 293 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 FCHO1O14526 889 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 BIRC5O15392 142 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 TIMM44O43615 452 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 SNAP91O60641 907 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 PRAMEF11O60813 436 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 ABLIM3O94929 683 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 SLC35E2BP0CK96 405 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 MBL2P11226 248 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 RALBP11234 206 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 TAS2R39P59534 338 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 IL10RBQ08334 325 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 CCDC15Q0P6D6 951 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 PARP15Q460N3 678 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 FSCBQ5H9T9 825 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 LRRC49Q8IUZ0 686 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 PARP9Q8IXQ6 854 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 ARL14EPQ8N8R7 260 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 OR13J1Q8NGT2 312 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 NXNL1Q96CM4 212 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 SLC7A6OSQ96CW6 309 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 C7orf26Q96N11 449 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 YME1L1Q96TA2 773 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 GPR22Q99680 433 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 LBHD1Q9BQE6 289 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 NMRAL1Q9HBL8 299 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 NOD2Q9HC29 1040 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 THAP1Q9NVV9 213 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 PLK2Q9NYY3 685 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 MARCH4Q9P2E8 410 aaPredicted RBP11.5□□□□□ -0.57
SCG2-201ENST00000305409 FBXO5Q9UKT4 447 aa11.5□□□□□ -0.57
SCG2-201ENST00000305409 MYLKQ15746 1914 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 MICAL3Q7RTP6 2002 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 ZBBXA8MT70 800 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 G3V2L1 256 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TEX28O15482 410 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms