RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 SATB2Q9UPW6 733 aa18.88■□□□□ 0.61
TRABD-201ENST00000303434 LOC105371267A0A1B0GV96 52 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 METTL18O95568 372 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
TRABD-201ENST00000303434 PTPN9P43378 593 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 ATXN1P54253 815 aaKnown RBP18.87■□□□□ 0.61
TRABD-201ENST00000303434 CCNA1P78396 465 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 GBE1Q04446 702 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 DPYSL2Q16555 572 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 SOWAHAQ2M3V2 549 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 ARHGAP17Q68EM7 881 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 C4orf22Q6V702 233 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 TMEM26Q6ZUK4 368 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 CDKL3Q8IVW4 592 aaPredicted RBP18.87■□□□□ 0.61
TRABD-201ENST00000303434 LRRC52Q8N7C0 313 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 CNDP2Q96KP4 475 aaKnown RBP18.87■□□□□ 0.61
TRABD-201ENST00000303434 ZNF347Q96SE7 839 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 C11orf84Q9BUA3 381 aaPredicted RBP18.87■□□□□ 0.61
TRABD-201ENST00000303434 HERC2P3Q9BVR0 1158 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 DHX35Q9H5Z1 703 aaKnown RBP18.87■□□□□ 0.61
TRABD-201ENST00000303434 SMYD2Q9NRG4 433 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 RNF19AQ9NV58 838 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 RNF181Q9P0P0 153 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 HES2Q9Y543 173 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 TLL2Q9Y6L7 1015 aa18.87■□□□□ 0.61
TRABD-201ENST00000303434 PLXNB2O15031 1838 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 GOLGA8CPA6NN73 597 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 ZNF839A8K0R7 811 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 CLOCKO15516 846 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 HCRTO43612 131 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 CLPXO76031 633 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 ZNF182P17025 639 aaPredicted RBP18.86■□□□□ 0.61
TRABD-201ENST00000303434 CRHR1P34998 444 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 GRSF1Q12849 480 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRABD-201ENST00000303434 PMS2P3Q13401 168 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 LRP8Q14114 963 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 RAB39AQ14964 217 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 TEDDM1Q5T9Z0 273 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 SLC27A1Q6PCB7 646 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 MAVSQ7Z434 540 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 MYO1HQ8N1T3 1032 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 FAM47BQ8NA70 645 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 BEST2Q8NFU1 509 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 CENPIQ92674 756 aaPredicted RBP18.86■□□□□ 0.61
TRABD-201ENST00000303434 LRRC39Q96DD0 335 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 MAELQ96JY0 434 aaKnown RBP18.86■□□□□ 0.61
TRABD-201ENST00000303434 CDRT15Q96T59 188 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 ADAMTS10Q9H324 1103 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 SETD4Q9NVD3 440 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 DCXO43602 365 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 RFPL1O75677 317 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 CCNA2P20248 432 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 TUBA1BP68363 451 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 KLF10Q13118 480 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 UNC5AQ6ZN44 842 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 TUBA1AQ71U36 451 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 CATSPER4Q7RTX7 472 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 SIX5Q8N196 739 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 KYQ8NBH2 561 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 SIGLEC10Q96LC7 697 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 CDHR5Q9HBB8 845 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 MTMR10Q9NXD2 777 aa18.86■□□□□ 0.61
TRABD-201ENST00000303434 RALGAPA2Q2PPJ7 1873 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 BCL10O95999 233 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 SMPD1P17405 629 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 MAGEA3P43357 314 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 SLC1A6P48664 564 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 TPTEP56180 551 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 MS4A2Q01362 244 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 C9orf57Q5W0N0 161 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 TTC33Q6PID6 262 aaPredicted RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 GET4Q7L5D6 327 aaPredicted RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 SLC26A9Q7LBE3 791 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 HEATR4Q86WZ0 1026 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 FAM49AQ9H0Q0 323 aaPredicted RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 CNGB3Q9NQW8 809 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 RABL2AQ9UBK7 228 aaPredicted RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 AP4E1Q9UPM8 1137 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 PLOD2O00469 737 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 HTRA2O43464 458 aaPredicted RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 MMP3P08254 477 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 LCP1P13796 627 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 YBX3P16989 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRABD-201ENST00000303434 ADORA2BP29275 332 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 NR2C2P49116 596 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 NUDT2P50583 147 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 BST2Q10589 180 aaKnown RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 ZNF846Q147U1 533 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 PPM1LQ5SGD2 360 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 KCNT2Q6UVM3 1135 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 ALKAL1Q6UXT8 129 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 ZNF534Q76KX8 674 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 ANKRD52Q8NB46 1076 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 FAR2Q96K12 515 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 KLHL32Q96NJ5 620 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 IPO11Q9UI26 975 aaKnown RBP18.85■□□□□ 0.61
TRABD-201ENST00000303434 TRAF6Q9Y4K3 522 aa18.85■□□□□ 0.61
TRABD-201ENST00000303434 PSMD11O00231 422 aa18.84■□□□□ 0.61
TRABD-201ENST00000303434 JRKO75564 520 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms