RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PRAMEP78395 509 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 TIFABQ6ZNK6 161 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 RNF135Q8IUD6 432 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 TRIM42Q8IWZ5 723 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 OR6P1Q8NGX9 317 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 ARRDC2Q8TBH0 407 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 SP7Q8TDD2 431 aaPredicted RBP14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 ZFRQ96KR1 1074 aaKnown RBP14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 PHTF1Q9UMS5 762 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 TBC1D30Q9Y2I9 924 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 PLLPQ9Y342 182 aa14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 USP15Q9Y4E8 981 aaPredicted RBP14.67□□□□□ -0.06
SHCBP1-201ENST00000303383 LINC01553A4QN01 128 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 GLRA3O75311 464 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 HLA-DPA1P20036 260 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 SERPINB4P48594 390 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 UBE2Q1Q7Z7E8 422 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 DCLK2Q8N568 766 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 PDCD6IPQ8WUM4 868 aaKnown RBP14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 PDFQ9HBH1 243 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 MRM3Q9HC36 420 aaKnown RBP14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 KLHL14Q9P2G3 628 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 ANAPC1Q9H1A4 1944 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 PTPRSQ13332 1948 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 RFPL2O75678 378 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 PTPN2P17706 415 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 LIMK2P53671 638 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 LAMB3Q13751 1172 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 SIRPB2Q5JXA9 342 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 LINGO4Q6UY18 593 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 PSKH2Q96QS6 385 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 FAM167BQ9BTA0 163 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 PLK2Q9NYY3 685 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 DCDC2Q9UHG0 476 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 TLK1Q9UKI8 766 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 SLC39A10Q9ULF5 831 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 MIA3Q5JRA6 1907 aa14.66□□□□□ -0.06
SHCBP1-201ENST00000303383 SNX3O60493 162 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 XYLBO75191 536 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 FGF19O95750 216 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 OLFM2O95897 454 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 FGF1P05230 155 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 CRHR1P34998 444 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 CCNFP41002 786 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SLC7A9P82251 487 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 UBE3AQ05086 875 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 GALNT3Q14435 633 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 FSTL4Q6MZW2 842 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 ZNF783Q6ZMS7 281 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 TMC8Q8IU68 726 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 NUDCD3Q8IVD9 361 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 CALML6Q8TD86 181 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 THOC1Q96FV9 657 aaKnown RBP14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 FEM1CQ96JP0 617 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 ARNT2Q9HBZ2 717 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 HCFC1R1Q9NWW0 138 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 GEMIN8Q9NWZ8 242 aaKnown RBP14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SLC2A6Q9UGQ3 507 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 E2F8A0AVK6 867 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 HMX2A2RU54 273 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 MUSKO15146 869 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 MMP2P08253 660 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 F7P08709 466 aaPredicted RBP14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SLC12A2P55011 1212 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 MPPE1Q53F39 396 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 ZNF470Q6ECI4 717 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 NLRP9Q7RTR0 991 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 VPS39Q96JC1 886 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SLCO1B3Q9NPD5 702 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SNX15Q9NRS6 342 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 INSIG1O15503 277 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SNAP91O60641 907 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 ALDOAP04075 364 aaKnown RBP14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 TROVE2P10155 538 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 RHOAP61586 193 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 ELMSAN1Q6PJG2 1045 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 CDHR3Q6ZTQ4 885 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 PIGWQ7Z7B1 504 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 BBS7Q8IWZ6 715 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 MGME1Q9BQP7 344 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 SMG9Q9H0W8 520 aaKnown RBP14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 NOD2Q9HC29 1040 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 STOML2Q9UJZ1 356 aa14.65□□□□□ -0.06
SHCBP1-201ENST00000303383 LEFTY2O00292 366 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 GJB3O75712 270 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 MZF1P28698 734 aaPredicted RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CLCN4P51793 760 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 TMPRSS15P98073 1019 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 TNK2Q07912 1038 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CTBP1Q13363 440 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 USP10Q14694 798 aaKnown RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 TSTD2Q5T7W7 516 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 KIAA0930Q6ICG6 404 aaPredicted RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CXorf57Q6NSI4 855 aaKnown RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 NEPROQ6NW34 567 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 SH2D5Q6ZV89 423 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CMC1Q7Z7K0 106 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 C2orf49Q9BVC5 232 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms