RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 ADKP55263 362 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 GEMIN4P57678 1058 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 SFSWAPQ12872 951 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 BOLA3Q53S33 107 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 ZNF805Q5CZA5 627 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 TPRG1LQ5T0D9 272 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 CCDC122Q5T0U0 273 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 IL27RAQ6UWB1 636 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 HORMAD1Q86X24 394 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 NAXDQ8IW45 347 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 MFSD2AQ8NA29 543 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 SAP25Q8TEE9 199 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 ASB12Q8WXK4 309 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 FUBP1Q96AE4 644 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 CELF6Q96J87 481 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 BMFQ96LC9 184 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 RBSNQ9H1K0 784 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 ERVMER34-1Q9H9K5 563 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 TM7SF3Q9NS93 570 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 DKK3Q9UBP4 350 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 ANAPC7Q9UJX3 599 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 PNMA8BQ9ULN7 279 aaPredicted RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 CA5BQ9Y2D0 317 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 PKD1L2Q7Z442 2459 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 A0A1W2PQU0 124 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 FAM47DPA6NHR8 397 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 RNGTTO60942 597 aaKnown RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 RNF8O76064 485 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 CER1O95813 267 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 TMEM253P0C7T8 217 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 TIMP2P16035 220 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 MAN1A1P33908 653 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 DPYSL3Q14195 570 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 UAP1L1Q3KQV9 507 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 ALG1LQ6GMV1 187 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 KDM7AQ6ZMT4 941 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 RAB44Q7Z6P3 723 aaPredicted RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 SLCO6A1Q86UG4 719 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 PGBD5Q8N414 524 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 PQLC3Q8N755 202 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 TSEN2Q8NCE0 465 aaKnown RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 PCDH19Q8TAB3 1148 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 SNX19Q92543 992 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 CENPTQ96BT3 561 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 SERAC1Q96JX3 654 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 CCDC114Q96M63 670 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 LENG8Q96PV6 779 aaPredicted RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 PSKH2Q96QS6 385 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 ELF4Q99607 663 aaPredicted RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 NCAPGQ9BPX3 1015 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 RCOR3Q9P2K3 495 aaPredicted RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 UVRAGQ9P2Y5 699 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 ITM2BQ9Y287 266 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 GOLGA4Q13439 2230 aaKnown RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 DSPP15924 2871 aaKnown RBP11.41□□□□□ -0.58
CLCC1-201ENST00000302500 ITPR1Q14643 2758 aa11.41□□□□□ -0.58
CLCC1-201ENST00000302500 CHD6Q8TD26 2715 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 CACNA1BQ00975 2339 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3DA0A087WVF3 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3IA0A087WXS9 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3EA0A087X179 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3KA0A087X1G2 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 SPAARA0A1B0GVQ0 90 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3FA6NER0 549 aaPredicted RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3LB9A6J9 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TLR4O00206 839 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 CBFA2T2O43439 604 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 BUB1O43683 1085 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 BNIP3LO60238 219 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 UGT2B4P06133 528 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3HP0C7X1 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 PRLRP16471 622 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 ITIH2P19823 946 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 AMPD1P23109 780 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 MAT2AP31153 395 aaKnown RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 HADHBP55084 474 aaKnown RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 SNRPD1P62314 119 aaKnown RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 IL10RBQ08334 325 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 NSUN2Q08J23 767 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 SLC10A7Q0GE19 358 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 OVGP1Q12889 678 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 MMRN1Q13201 1228 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 AGERQ15109 404 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TAZQ16635 292 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 NCBP2-AS2Q69YL0 99 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3GQ6DHY5 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3CQ6IPX1 549 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TBC1D3Q8IZP1 549 aaPredicted RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 CBARPQ8N350 705 aaPredicted RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 TEX26Q8N6G2 289 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 HCAR2Q8TDS4 363 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 GATA6Q92908 595 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 EXOC2Q96KP1 924 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms