RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 EPHX1P07099 455 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 DCNP07585 359 aaKnown RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 PDHA1P08559 390 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 HSPA9P38646 679 aaKnown RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 CD86P42081 329 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 GRIA1P42261 906 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 RPL21P46778 160 aaKnown RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 RPS9P46781 194 aaKnown RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 NUBP1P53384 320 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 ST8SIA6P61647 398 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 TRAF2Q12933 501 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 ZNF235Q14590 738 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 PTPRRQ15256 657 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 CRY1Q16526 586 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 ANKRD22Q5VYY1 191 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 GSTA5Q7RTV2 222 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 CAMK1DQ8IU85 385 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 NAT8LQ8N9F0 302 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 GRK7Q8WTQ7 553 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 NSMCE1Q8WV22 266 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 ECHDC3Q96DC8 303 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 ERLEC1Q96DZ1 483 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 RUNDC3BQ96NL0 473 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 ERP44Q9BS26 406 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 SLC6A17Q9H1V8 727 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 RSPH9Q9H1X1 276 aaPredicted RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 EPC1Q9H2F5 836 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 CHRDQ9H2X0 955 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 GRHL1Q9NZI5 618 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 PAK5Q9P286 719 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 SUN2Q9UH99 717 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 MRPS17Q9Y2R5 130 aaKnown RBP9.6□□□□□ -0.87
RFX3-201ENST00000302303 SIT1Q9Y3P8 196 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 PCDHGC4Q9Y5F7 938 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 BPTFQ12830 3046 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 TMEM221A6NGB7 291 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 M0R296 226 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 LEFTY1O75610 366 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 ZNF189O75820 626 aaPredicted RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 TMEM63AO94886 807 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 SLU7O95391 586 aaKnown RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 PIGNO95427 931 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 POP4O95707 220 aaKnown RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 NNMTP40261 264 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 VPS41P49754 854 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 DRG2P55039 364 aaKnown RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 AP1S1P61966 158 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 SNRPD1P62314 119 aaKnown RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 GPS1Q13098 491 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 KCNJ11Q14654 390 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 SLC14A2Q15849 920 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 HSF5Q4G112 596 aaPredicted RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 RALGPS1Q5JS13 557 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 SYCP2LQ5T4T6 812 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 RNASEH2BQ5TBB1 312 aaKnown RBP9.59□□□□□ -0.87
RFX3-201ENST00000302303 RANBP10Q6VN20 620 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 MAMSTRQ6ZN01 415 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 ZNF534Q76KX8 674 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 SYT13Q7L8C5 426 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 MAATS1Q7Z4T9 603 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 CCDC89Q8N998 374 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 CCDC26Q8TAB7 109 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 FAM131CQ96AQ9 280 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 GDAP1L1Q96MZ0 367 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 SMIM14Q96QK8 99 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 HEPHQ9BQS7 1158 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 EPHX3Q9H6B9 360 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 C11orf16Q9NQ32 467 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 RAB6BQ9NRW1 208 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 RSPH14Q9UHP6 348 aa9.59□□□□□ -0.87
RFX3-201ENST00000302303 C10orf142B7Z368 130 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 DNALI1O14645 258 aaPredicted RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 SPINT1O43278 529 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 BNIP3LO60238 219 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 SUN1O94901 812 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 SEC31AO94979 1220 aaKnown RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 IGSF6O95976 241 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 GAS8O95995 478 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 AGTP01019 485 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 ATXN1LP0C7T5 689 aaKnown RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 HOXB2P14652 356 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 AOC1P19801 751 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 CES1P23141 567 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 ECHS1P30084 290 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 DRD3P35462 400 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 CHRNA4P43681 627 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 WNT3AP56704 352 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 RPS14P62263 151 aaKnown RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 SATB1Q01826 763 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 ITKQ08881 620 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 MTAPQ13126 283 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 SPARCL1Q14515 664 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 ELAVL3Q14576 367 aaKnown RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 NAA30Q147X3 362 aaPredicted RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 PPP1R7Q15435 360 aa9.58□□□□□ -0.88
RFX3-201ENST00000302303 GLE1Q53GS7 698 aaKnown RBP9.58□□□□□ -0.88
RFX3-201ENST00000302303 HIBCHQ6NVY1 386 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms