RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
TPM3-202ENST00000302206 ZNF235Q14590 738 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
TPM3-202ENST00000302206 DBN1Q16643 649 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 QPCTQ16769 361 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 MPP7Q5T2T1 576 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 TEDDM1Q5T9Z0 273 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 IL31Q6EBC2 164 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 KIAA0930Q6ICG6 404 aaPredicted RBP12.15□□□□□ -0.46
TPM3-202ENST00000302206 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
TPM3-202ENST00000302206 CXorf57Q6NSI4 855 aaKnown RBP12.15□□□□□ -0.46
TPM3-202ENST00000302206 FOXR1Q6PIV2 292 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 SPATA31D4Q6ZUB0 917 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 GAREM2Q75VX8 874 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 NLRP9Q7RTR0 991 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 KCNMB4Q86W47 210 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 CNTN4Q8IWV2 1026 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 UNC5BQ8IZJ1 945 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 CACNA2D3Q8IZS8 1091 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 ARL14EPQ8N8R7 260 aaPredicted RBP12.15□□□□□ -0.46
TPM3-202ENST00000302206 LEMD2Q8NC56 503 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 GDAP1Q8TB36 358 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 WBP2Q969T9 261 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 FEM1CQ96JP0 617 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 RBBP8Q99708 897 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 EPHX3Q9H6B9 360 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 TLR9Q9NR96 1032 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 CHRAC1Q9NRG0 131 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 CPQQ9Y646 472 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 DENND4CQ5VZ89 1909 aa12.15□□□□□ -0.46
TPM3-202ENST00000302206 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.47
TPM3-202ENST00000302206 A0A0D9SEW6 157 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 CXorf51AA0A1B0GTR3 108 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 HEATR9A2RTY3 570 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 LCHNA4D1U4 455 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 TIMM44O43615 452 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 NMBRP28336 390 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 FOXN2P32314 431 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 ETV4P43268 484 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 MAGEA12P43365 314 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
TPM3-202ENST00000302206 CLCN4P51793 760 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 LIMK2P53671 638 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 TFF2Q03403 129 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 ITIH4Q14624 930 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 UGP2Q16851 508 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 INSCQ1MX18 579 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 PPM1LQ5SGD2 360 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 RNF43Q68DV7 783 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 TXNDC8Q6A555 127 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 CES3Q6UWW8 571 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 ALYREFQ86V81 257 aaKnown RBP12.14□□□□□ -0.47
TPM3-202ENST00000302206 CCDC197Q8NCU1 140 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 OR7D4Q8NG98 312 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
TPM3-202ENST00000302206 LRRC8CQ8TDW0 803 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 PEX13Q92968 403 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 MFSD3Q96ES6 412 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 CABS1Q96KC9 395 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 SAMD11Q96NU1 681 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 SRPK1Q96SB4 655 aaKnown RBP12.14□□□□□ -0.47
TPM3-202ENST00000302206 CYP2S1Q96SQ9 504 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 SEMA3CQ99985 751 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 PLCD4Q9BRC7 762 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 MCMBPQ9BTE3 642 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 IQCGQ9H095 443 aaKnown RBP12.14□□□□□ -0.47
TPM3-202ENST00000302206 NKX2-4Q9H2Z4 354 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 MLXIPLQ9NP71 852 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 ASAH2Q9NR71 780 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 C20orf96Q9NUD7 363 aaPredicted RBP12.14□□□□□ -0.47
TPM3-202ENST00000302206 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 RIMKLBQ9ULI2 386 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 PLLPQ9Y342 182 aa12.14□□□□□ -0.47
TPM3-202ENST00000302206 MTCL1Q9Y4B5 1905 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 LINC01553A4QN01 128 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 GOLGA8RI6L899 631 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 TSPAN3O60637 253 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 TBL1XO60907 577 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 FGF1P05230 155 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 HNRNPA1P09651 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM3-202ENST00000302206 DNAJB1P25685 340 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 ARCN1P48444 511 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 SGSHP51688 502 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 MAXP61244 160 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 CYP4F8P98187 520 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 BMPR2Q13873 1038 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 MPPE1Q53F39 396 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 INO80DQ53TQ3 878 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms