RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC35E2BP0CK96 405 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 TTKP33981 857 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 CNSTQ6PJW8 725 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 LCLAT1Q6UWP7 414 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 SIX6OS1Q8N1H7 587 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 SPATA6LQ8N4H0 392 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 SCAIQ8N9R8 606 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 PCYOX1LQ8NBM8 494 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 RDH11Q8TC12 318 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 CASP10Q92851 521 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 OMDQ99983 421 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 OSBPL2Q9H1P3 480 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 LRRC40Q9H9A6 602 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 MRPL40Q9NQ50 206 aaKnown RBP11□□□□□ -0.65
ZNF558-201ENST00000301475 C1orf232A0A0U1RR37 186 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 IQCA1LA6NCM1 817 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 TOMM70O94826 608 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 KCNH1O95259 989 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 IDUAP35475 653 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SLC6A3Q01959 620 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 STX5Q13190 355 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 TARBP2Q15633 366 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 TBCELQ5QJ74 424 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 LDLRAP1Q5SW96 308 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SNRNP48Q6IEG0 339 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 C8orf82Q6P1X6 216 aaPredicted RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 KCNMB4Q86W47 210 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 CAMK1DQ8IU85 385 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 NIM1KQ8IY84 436 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 PACRGLQ8N7B6 248 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 ANKRD52Q8NB46 1076 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 RNF149Q8NC42 400 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 PCYT2Q99447 389 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 MTG1Q9BT17 334 aaPredicted RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 TDRD1Q9BXT4 1180 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 FTHL17Q9BXU8 183 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 UPF3AQ9H1J1 476 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 AGPAT4Q9NRZ5 378 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 IARS2Q9NSE4 1012 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 VANGL2Q9ULK5 521 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 OAZ3Q9UMX2 235 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 TIMM44O43615 452 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 CNOT3O75175 753 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 DDHD2O94830 711 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 APOA4P06727 396 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 HNRNPLP14866 589 aaKnown RBP eCLIP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 CCNA2P20248 432 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 MAP4P27816 1152 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 LRPAP1P30533 357 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 OXTRP30559 389 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 C1QTNF8P60827 252 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 FSTL1Q12841 308 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 HSDL1Q3SXM5 330 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SAMD4BQ5PRF9 694 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 MPZL3Q6UWV2 235 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 CCDC80Q76M96 950 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 PIGZQ86VD9 579 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SPPL2BQ8TCT7 592 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 NSUN6Q8TEA1 469 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SEPT8Q92599 483 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 FEM1CQ96JP0 617 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 C11orf84Q9BUA3 381 aaPredicted RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 NIFKQ9BYG3 293 aaKnown RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 NANOGQ9H9S0 305 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 CCM2LQ9NUG4 571 aaPredicted RBP10.99□□□□□ -0.65
ZNF558-201ENST00000301475 GIN1Q9NXP7 522 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 GTSE1Q9NYZ3 720 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 GTF2IRD1Q9UHL9 959 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 SLC30A1Q9Y6M5 507 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 PARP14Q460N5 1801 aa10.99□□□□□ -0.65
ZNF558-201ENST00000301475 CENPFP49454 3210 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CCDC78A2IDD5 438 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 KCNK1O00180 336 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 EI24O14681 340 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ACOX3O15254 700 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CLOCKO15516 846 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 B4GAT1O43505 415 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SRP72O76094 671 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ESRRBO95718 433 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 EGFRP00533 1210 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 JAK1P23458 1154 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 EFNA5P52803 228 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CXCL9Q07325 125 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 GRSF1Q12849 480 aaKnown RBP eCLIP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 PPIL2Q13356 520 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CERCAMQ5T4B2 595 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 IRAK1BP1Q5VVH5 260 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 RPS27LQ71UM5 84 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TERB1Q8NA31 727 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TXNDC5Q8NBS9 432 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 OR13F1Q8NGS4 319 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 GPR22Q99680 433 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 DNAI2Q9GZS0 605 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CCDC68Q9H2F9 335 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms