RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 IFI44Q8TCB0 444 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 ZNF592Q92610 1267 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 HIC2Q96JB3 615 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 SLC17A9Q9BYT1 436 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 TCEAL2Q9H3H9 227 aaPredicted RBP9.47□□□□□ -0.89
CNOT9-202ENST00000295701 DYRK4Q9NR20 520 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.47□□□□□ -0.89
CNOT9-202ENST00000295701 NLGN3Q9NZ94 848 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 APEX2Q9UBZ4 518 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 ZNF212Q9UDV6 495 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 IL36AQ9UHA7 158 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 GGT7Q9UJ14 662 aa9.47□□□□□ -0.89
CNOT9-202ENST00000295701 TEX51A0A1B0GUA7 166 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 CPED1A4D0V7 1026 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 IGLON5A6NGN9 336 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 A6NNZ2 444 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 CYSRT1A8MQ03 144 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
CNOT9-202ENST00000295701 OR1E1P30953 314 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 KRT9P35527 623 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ACVRL1P37023 503 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ARF5P84085 180 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 CFHR1Q03591 330 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 EXOC3L4Q17RC7 722 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 DEFB133Q30KQ1 61 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 HS1BP3Q53T59 392 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 BRMS1LQ5PSV4 323 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 PERM1Q5SV97 790 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 DPY19L2P1Q6NXN4 242 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 GUSBP11Q6P575 273 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 PARS2Q7L3T8 475 aaKnown RBP9.46□□□□□ -0.9
CNOT9-202ENST00000295701 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ZNF605Q86T29 641 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 DCAF4L2Q8NA75 395 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 NETO2Q8NC67 525 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ZNF248Q8NDW4 579 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 OR6K2Q8NGY2 324 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 MAPK15Q8TD08 544 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 NT5C3BQ969T7 300 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 VOPP1Q96AW1 172 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 VCPIP1Q96JH7 1222 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 DEPDC7Q96QD5 511 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 KLF6Q99612 283 aaPredicted RBP9.46□□□□□ -0.9
CNOT9-202ENST00000295701 C2orf49Q9BVC5 232 aaPredicted RBP9.46□□□□□ -0.9
CNOT9-202ENST00000295701 HDAC8Q9BY41 377 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ASCL3Q9NQ33 180 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 GPR27Q9NS67 375 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 DNAJC12Q9UKB3 198 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 PNMA8BQ9ULN7 279 aaPredicted RBP9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ITM2BQ9Y287 266 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 FADS3Q9Y5Q0 445 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 HS3ST3A1Q9Y663 406 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 TENM4Q6N022 2769 aa9.46□□□□□ -0.9
CNOT9-202ENST00000295701 ASH1LQ9NR48 2969 aaKnown RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 IGLV3-10A0A075B6K4 115 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 CDC14CA4D256 554 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 GOLGA8SH3BPF8 625 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 KLK10O43240 276 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 CSF2P04141 144 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ADRB3P13945 408 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ITIH2P19823 946 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 L1CAMP32004 1257 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 FLT3P36888 993 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ABL2P42684 1182 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 MTIF2P46199 727 aaKnown RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 LSSP48449 732 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 CCNHP51946 323 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 NEK3P51956 506 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 PCBP4P57723 403 aaKnown RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 EIF2B5Q13144 721 aaKnown RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 C1orf61Q13536 156 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 PDE1CQ14123 709 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 LY6DQ14210 128 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 TAF1BQ53T94 588 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 CARD16Q5EG05 197 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 C3orf38Q5JPI3 329 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 LRRC73Q5JTD7 316 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 TAF3Q5VWG9 929 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 LEKR1Q6ZMV7 388 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 EFL1Q7Z2Z2 1120 aaKnown RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 PHLDB2Q86SQ0 1253 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 SETD3Q86TU7 594 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 FAM131BQ86XD5 332 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 RBFAQ8N0V3 343 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 FAM181AQ8N9Y4 354 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 LSM14AQ8ND56 463 aaKnown RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 LMX1AQ8TE12 382 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 PGAP3Q96FM1 320 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ATXN7L3BQ96GX2 97 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 PRR11Q96HE9 360 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 FEM1CQ96JP0 617 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 C1orf74Q96LT6 269 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 CCDC114Q96M63 670 aa9.45□□□□□ -0.9
CNOT9-202ENST00000295701 ZNF578Q96N58 590 aaPredicted RBP9.45□□□□□ -0.9
CNOT9-202ENST00000295701 HEPHQ9BQS7 1158 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms