RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 C9orf64Q5T6V5 341 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 PRPF39Q86UA1 669 aaKnown RBP15.35■□□□□ 0.05
CCDC140-201ENST00000295226 OR2A12Q8NGT7 310 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 AENQ8WTP8 325 aaKnown RBP15.35■□□□□ 0.05
CCDC140-201ENST00000295226 CASKIN2Q8WXE0 1202 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 SHDQ96IW2 340 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 POLR1EQ9GZS1 481 aaKnown RBP15.35■□□□□ 0.05
CCDC140-201ENST00000295226 GBA3Q9H227 469 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 SCUBE2Q9NQ36 999 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 PAK5Q9P286 719 aa15.35■□□□□ 0.05
CCDC140-201ENST00000295226 FAM187AA6NFU0 413 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 PMPCBO75439 489 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 HEXIM1O94992 359 aaKnown RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 IVDP26440 423 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 CCNHP51946 323 aaPredicted RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 BASP1P80723 227 aaKnown RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 PARP6Q2NL67 630 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 HNRNPA1L2Q32P51 320 aaKnown RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 KIAA1211LQ6NV74 962 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 SRLQ86TD4 932 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 STK40Q8N2I9 435 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 PCDH20Q8N6Y1 951 aaKnown RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 OR2AP1Q8NGE2 309 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 VOPP1Q96AW1 172 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 ISG20Q96AZ6 181 aaKnown RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 IMP4Q96G21 291 aaKnown RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 MLPHQ9BV36 600 aaPredicted RBP15.34■□□□□ 0.05
CCDC140-201ENST00000295226 CEP44Q9C0F1 390 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 SLC25A51Q9H1U9 297 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 SLC8A2Q9UPR5 921 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 PCDHGC4Q9Y5F7 938 aa15.34■□□□□ 0.05
CCDC140-201ENST00000295226 TTC28Q96AY4 2481 aa15.33■□□□□ 0.05
CCDC140-201ENST00000295226 CXorf51AA0A1B0GTR3 108 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 TCRBV7S3A2A0A539 114 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 PIGNO95427 931 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 IGSF6O95976 241 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 NTSR1P30989 418 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.04
CCDC140-201ENST00000295226 RPL21P46778 160 aaKnown RBP15.33■□□□□ 0.04
CCDC140-201ENST00000295226 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
CCDC140-201ENST00000295226 SNRPD1P62314 119 aaKnown RBP15.33■□□□□ 0.04
CCDC140-201ENST00000295226 SKOR1P84550 965 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 GUCY2DQ02846 1103 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 NSUN2Q08J23 767 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC140-201ENST00000295226 PCSK7Q16549 785 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 MYLK3Q32MK0 819 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 POM121L1PQ3SYA9 428 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 ITPRIPL1Q6GPH6 555 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 NCEH1Q6PIU2 408 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 FLCNQ8NFG4 579 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 GRIN3AQ8TCU5 1115 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 CAVIN3Q969G5 261 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 GDAP1L1Q96MZ0 367 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 FCRL5Q96RD9 977 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 NUDCD1Q96RS6 583 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 ERP44Q9BS26 406 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 ZDHHC6Q9H6R6 413 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 PRSS16Q9NQE7 514 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 GDF3Q9NR23 364 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 C2orf42Q9NWW7 574 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 ANKRD36A6QL64 1941 aa15.33■□□□□ 0.04
CCDC140-201ENST00000295226 CTSLP07711 333 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 COL9A1P20849 921 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 HSPA9P38646 679 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 MRPS21P82921 87 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 DMTNQ08495 405 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 ENPP2Q13822 863 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 GAS6Q14393 721 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 ANKRD22Q5VYY1 191 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 DUPD1Q68J44 220 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 SYDE1Q6ZW31 735 aaPredicted RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 METTL3Q86U44 580 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 CAMK1DQ8IU85 385 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 KDM1BQ8NB78 822 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 EDAQ92838 391 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 APOL2Q9BQE5 337 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 EPB41L5Q9HCM4 733 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 MRPS17Q9Y2R5 130 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 UTP11Q9Y3A2 253 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 EDDM13A0A1B0GTR0 161 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 DCXO43602 365 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 USP12O75317 370 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 GSRP00390 522 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 DCNP07585 359 aaKnown RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 APRTP07741 180 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 RECQLP46063 649 aaPredicted RBP15.32■□□□□ 0.04
CCDC140-201ENST00000295226 METAP1P53582 386 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 FBXO43Q4G163 708 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 ARSIQ5FYB1 569 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 IZUMO3Q5VZ72 239 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 ALG1LQ6GMV1 187 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 GOLGA6L1Q8N7Z2 621 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 IPMKQ8NFU5 416 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 CPT1BQ92523 772 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 FAM129BQ96TA1 746 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 SLC6A17Q9H1V8 727 aa15.32■□□□□ 0.04
CCDC140-201ENST00000295226 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms