RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ARMC3Q5W041 872 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 GPATCH11Q8N954 259 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 SLC43A3Q8NBI5 491 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 PSMG2Q969U7 264 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 TSEN34Q9BSV6 310 aaKnown RBP20.2■□□□□ 0.82
CXCL16-201ENST00000293778 ATP13A1Q9HD20 1204 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 STARD7Q9NQZ5 370 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 VWA8A3KMH1 1905 aa20.2■□□□□ 0.82
CXCL16-201ENST00000293778 F8W8V4 182 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 HMBSP08397 361 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 MPSTP25325 297 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 PSEN1P49768 467 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 DSC2Q02487 901 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 FSCBQ5H9T9 825 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 LRRC8DQ7L1W4 858 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 MAPK15Q8TD08 544 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 NXNL1Q96CM4 212 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 MOCOSQ96EN8 888 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 MAN1C1Q9NR34 630 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 XPR1Q9UBH6 696 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 SLC12A8A0AV02 714 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 TARM1B6A8C7 271 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 CHRM1P11229 460 aaPredicted RBP20.19■□□□□ 0.82
CXCL16-201ENST00000293778 CLNS1AP54105 237 aaKnown RBP20.19■□□□□ 0.82
CXCL16-201ENST00000293778 TAS2R39P59534 338 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 TRMT5Q32P41 509 aaKnown RBP20.19■□□□□ 0.82
CXCL16-201ENST00000293778 MGAT5BQ3V5L5 792 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 CMTM5Q96DZ9 223 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 GPR78Q96P69 363 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 RANBP9Q96S59 729 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 SEPT5Q99719 369 aaPredicted RBP20.19■□□□□ 0.82
CXCL16-201ENST00000293778 ACSS2Q9NR19 701 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 GEMIN8Q9NWZ8 242 aaKnown RBP20.19■□□□□ 0.82
CXCL16-201ENST00000293778 SLC7A8Q9UHI5 535 aa20.19■□□□□ 0.82
CXCL16-201ENST00000293778 FGFR3P22607 806 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 GCKP35557 465 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 NAGLUP54802 743 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 SLC12A2P55011 1212 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 SLC25A3Q00325 362 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 POU4F1Q01851 419 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 TSNAXIP1Q2TAA8 658 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 TSTD2Q5T7W7 516 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 RASIP1Q5U651 963 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 SNX30Q5VWJ9 437 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 KIAA0408Q6ZU52 694 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 RPRD1AQ96P16 312 aaPredicted RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 LBHD1Q9BQE6 289 aaPredicted RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 PCDHB7Q9Y5E2 793 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 DOCK4Q8N1I0 1966 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 A0A087X1B8 175 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 MTMR11A4FU01 709 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 E9PBE3 544 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 MATN2O00339 956 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 DCXO43602 365 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 KLHL41O60662 606 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 PIGNO95427 931 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 MMP2P08253 660 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 HOXD10P28358 340 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 CCR10P46092 362 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 GATMP50440 423 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 RPL14P50914 215 aaKnown RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 SLC34A1Q06495 639 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 DLG1Q12959 904 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 ARL13AQ5H913 290 aaPredicted RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 METTL21CQ5VZV1 264 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 RIPOR1Q6ZS17 1223 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 TMC7Q7Z402 723 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 PHTF2Q8N3S3 785 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 SPATA6LQ8N4H0 392 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 TEX26Q8N6G2 289 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 SPPL2BQ8TCT7 592 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 CALML6Q8TD86 181 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 DTX3LQ8TDB6 740 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 NAF1Q96HR8 494 aaKnown RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 PANX3Q96QZ0 392 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 ELAC1Q9H777 363 aaKnown RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 TCF7L2Q9NQB0 619 aa20.18■□□□□ 0.82
CXCL16-201ENST00000293778 STX18Q9P2W9 335 aaKnown RBP20.18■□□□□ 0.82
CXCL16-201ENST00000293778 CEP350Q5VT06 3117 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 DRGXA6NNA5 263 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 DLX3O60479 287 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 RAMP2O60895 175 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 AOC2O75106 756 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 TBX10O75333 385 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 IGLV3-27P01718 113 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 SELPP16109 830 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 VHLP40337 213 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 HK2P52789 917 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 PRKAA1Q13131 559 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 POLD3Q15054 466 aaPredicted RBP20.17■□□□□ 0.82
CXCL16-201ENST00000293778 CNSTQ6PJW8 725 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 CIR1Q86X95 450 aaPredicted RBP20.17■□□□□ 0.82
CXCL16-201ENST00000293778 GABPB2Q8TAK5 448 aaPredicted RBP20.17■□□□□ 0.82
CXCL16-201ENST00000293778 CD99L2Q8TCZ2 262 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 RAET1EQ8TD07 263 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 OR52B2Q96RD2 323 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 SHCBP1LQ9BZQ2 653 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 MRPL46Q9H2W6 279 aaKnown RBP20.17■□□□□ 0.82
CXCL16-201ENST00000293778 CRISPLD1Q9H336 500 aa20.17■□□□□ 0.82
CXCL16-201ENST00000293778 MARCH5Q9NX47 278 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms