RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RFFLQ8WZ73 363 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 KLHL32Q96NJ5 620 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 HPCAL4Q9UM19 191 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 LY6G6EA0A0G2JKS1 128 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 WASH4PA8MWX3 477 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 AREL1O15033 823 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 BUB1O43683 1085 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 CREB3O43889 395 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 POP4O95707 220 aaKnown RBP25.6■■□□□ 1.69
U2AF1-201ENST00000291552 MBD3O95983 291 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 E4F1Q66K89 784 aaPredicted RBP25.6■■□□□ 1.69
U2AF1-201ENST00000291552 RAB7BQ96AH8 199 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 IFT43Q96FT9 208 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 GPATCH2LQ9NWQ4 482 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 U3KQA8 63 aa25.6■■□□□ 1.69
U2AF1-201ENST00000291552 RP1P56715 2156 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 LRP4O75096 1905 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 ZSCAN5CA6NGD5 496 aaPredicted RBP25.59■■□□□ 1.69
U2AF1-201ENST00000291552 RASA4BC9J798 803 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 GOLGA6L22H0YM25 854 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 RASA4O43374 803 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 TSPAN6O43657 245 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 INSM1Q01101 510 aaPredicted RBP25.59■■□□□ 1.69
U2AF1-201ENST00000291552 SERINC3Q13530 473 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 ANO6Q4KMQ2 910 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 DNAAF5Q86Y56 855 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 FAM174AQ8TBP5 190 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 HNRNPLLQ8WVV9 542 aaKnown RBP25.59■■□□□ 1.69
U2AF1-201ENST00000291552 NXPE2Q96DL1 559 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 GDAP1L1Q96MZ0 367 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 LENG8Q96PV6 779 aaPredicted RBP25.59■■□□□ 1.69
U2AF1-201ENST00000291552 RTN4Q9NQC3 1192 aaKnown RBP25.59■■□□□ 1.69
U2AF1-201ENST00000291552 DNAJC28Q9NX36 388 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 LHX3Q9UBR4 397 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 KLF15Q9UIH9 416 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 PTPRQQ9UMZ3 2332 aa25.59■■□□□ 1.69
U2AF1-201ENST00000291552 SMG1Q96Q15 3661 aaKnown RBP25.59■■□□□ 1.69
U2AF1-201ENST00000291552 SPTY2D1-AS1A0A0U1RR47 76 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 ATMINO43313 823 aaPredicted RBP25.58■■□□□ 1.69
U2AF1-201ENST00000291552 ZSCAN30Q86W11 494 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 ZNF354CQ86Y25 554 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 DCP2Q8IU60 420 aaKnown RBP25.58■■□□□ 1.69
U2AF1-201ENST00000291552 UMODL1-AS1Q8N2C9 162 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 EPAS1Q99814 870 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 OSBPL1AQ9BXW6 950 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 TTYH3Q9C0H2 523 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 SCUBE2Q9NQ36 999 aa25.58■■□□□ 1.69
U2AF1-201ENST00000291552 FASNP49327 2511 aaKnown RBP25.57■■□□□ 1.68
U2AF1-201ENST00000291552 ANKRD62A6NC57 917 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 INSIG1O15503 277 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 NEBLO76041 1014 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 MYF5P13349 255 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 NME1P15531 152 aaKnown RBP25.57■■□□□ 1.68
U2AF1-201ENST00000291552 ITIH2P19823 946 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 AIF1P55008 147 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 YBEYP58557 167 aaPredicted RBP25.57■■□□□ 1.68
U2AF1-201ENST00000291552 MAMLD1Q13495 774 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 PARP15Q460N3 678 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 INO80DQ53TQ3 878 aaPredicted RBP25.57■■□□□ 1.68
U2AF1-201ENST00000291552 DCUN1D2Q6PH85 259 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 GDPD4Q6W3E5 623 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 TMC6Q7Z403 805 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 ARFGAP1Q8N6T3 406 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 ZNF548Q8NEK5 533 aaPredicted RBP25.57■■□□□ 1.68
U2AF1-201ENST00000291552 CASKIN2Q8WXE0 1202 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 ASB12Q8WXK4 309 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 PEBP4Q96S96 227 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 PDFQ9HBH1 243 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 NLGN3Q9NZ94 848 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 MYO6Q9UM54 1294 aa25.57■■□□□ 1.68
U2AF1-201ENST00000291552 LRRC53A6NM62 1247 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 TMCO5BA8MYB1 307 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 IGSF6O95976 241 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 CSF2P04141 144 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 IGFALSP35858 605 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 RABIFP47224 123 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 PFN3P60673 137 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 RHOAP61586 193 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 DAB2P98082 770 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 SGCGQ13326 291 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 CYTH1Q15438 398 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 CA9Q16790 459 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 PLEKHA7Q6IQ23 1121 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 PDZD3Q86UT5 571 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 PARGQ86W56 976 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 DCBLD1Q8N8Z6 715 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 DENND6BQ8NEG7 585 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 EXOC2Q96KP1 924 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 TRIM7Q9C029 511 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 LRRC19Q9H756 370 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 PNMA8BQ9ULN7 279 aaPredicted RBP25.56■■□□□ 1.68
U2AF1-201ENST00000291552 MFHAS1Q9Y4C4 1052 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 BAHCC1Q9P281 2608 aa25.56■■□□□ 1.68
U2AF1-201ENST00000291552 A0A087WV48 116 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 K7ESM1 405 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 NEMP1O14524 444 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 FPGTO14772 594 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 SCAMP1O15126 338 aa25.55■■□□□ 1.68
U2AF1-201ENST00000291552 FGF10O15520 208 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-201ENST00000291552 TLX3O43711 291 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms