RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ITIH5Q86UX2 942 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 PIK3C3Q8NEB9 887 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 FBXO32Q969P5 355 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 TBL1YQ9BQ87 522 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 LMO7Q8WWI1 1683 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 IRGMA1A4Y4 181 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 MSCO60682 206 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 PABPC1P11940 636 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 CDK9P50750 372 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 FSCN1Q16658 493 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 MTX3Q5HYI7 312 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 GPR63Q9BZJ6 419 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 TMEM165Q9HC07 324 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 CCDC162PA2VCL2 907 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 F8VP50 259 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 PLA2G6O60733 806 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 MARCKSL1P49006 195 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 ZNF143P52747 638 aaPredicted RBP17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 SLC6A3Q01959 620 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 CTXN3Q4LDR2 81 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 MCFD2Q8NI22 146 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 ANKHQ9HCJ1 492 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 RPTORQ8N122 1335 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 CCNKO75909 580 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 H6PDO95479 791 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 TSPAN19P0C672 248 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 FGFR3P22607 806 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 CDH18Q13634 790 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 CCNYL2Q5T2Q4 361 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 EPB41L1Q9H4G0 881 aa17.68■□□□□ 0.42
PCDHA13-201ENST00000289272 RBL1P28749 1068 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 CSNK2BP67870 215 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 MFSD10Q14728 455 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 HERC3Q15034 1050 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ATG14Q6ZNE5 492 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ANKS1BQ7Z6G8 1248 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 APOL5Q9BWW9 433 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 TCHHQ07283 1943 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 LINC00854A0A1B0GVQ3 168 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 PIPSLA2A3N6 862 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 LOC110117498-PIK3R3F6TDL0 507 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ITGB5P18084 799 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 CYP2C18P33260 490 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 CHI3L1P36222 383 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 NPY5RQ15761 445 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 INTS11Q5TA45 600 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 CATSPERGQ6ZRH7 1159 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 FGD2Q7Z6J4 655 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 UNC5BQ8IZJ1 945 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 PIK3R3Q92569 461 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 FGFBP2Q9BYJ0 223 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 PTBP2Q9UKA9 531 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 PADI4Q9UM07 663 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 A0A1W2PPM1 405 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 SLC2A4P14672 509 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ITGA2P17301 1181 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ADORA2AP29274 412 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 JAM2P57087 298 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ZNF549Q6P9A3 640 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 KCNT2Q6UVM3 1135 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 KIAA0408Q6ZU52 694 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 RAB43Q86YS6 212 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 UTP15Q8TED0 518 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ACE2Q9BYF1 805 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 CXorf21Q9HAI6 301 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 SMPD3Q9NY59 655 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 INVSQ9Y283 1065 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 NFASCO94856 1347 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 H0YC42 278 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ZSCAN5DPP0CG00 497 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 TCF3P15923 654 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 SLC1A5Q15758 541 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 TXNDC11Q6PKC3 985 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 TMEM110Q86TL2 294 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 ROPN1LQ96C74 230 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 GPATCH1Q9BRR8 931 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 CLN6Q9NWW5 311 aa17.67■□□□□ 0.42
PCDHA13-201ENST00000289272 NOL4O94818 638 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 SGO1Q5FBB7 561 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 CRTC3Q6UUV7 619 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 SATL1Q86VE3 508 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 BPIFB6Q8NFQ5 453 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ZNF570Q96NI8 536 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 EMILIN2Q9BXX0 1053 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 TMEM9Q9P0T7 183 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 SLC17A7Q9P2U7 560 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 CRLS1Q9UJA2 301 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 PCDHAC2Q9Y5I4 1007 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 SLURP2P0DP57 97 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 EPHB3P54753 998 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 HERC6Q8IVU3 1022 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 KBTBD2Q8IY47 623 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ZNF540Q8NDQ6 660 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms