RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PDCD6IPQ8WUM4 868 aaKnown RBP18.14■□□□□ 0.49
CAPN1-201ENST00000279247 IFT43Q96FT9 208 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF558Q96NG5 402 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-201ENST00000279247 C11orf49Q9H6J7 331 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 PNPOQ9NVS9 261 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 PLXNA3P51805 1871 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 IGLV3-10A0A075B6K4 115 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 WASH4PA8MWX3 477 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 TIMM44O43615 452 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 IGLV3-27P01718 113 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 MMP2P08253 660 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 ZDHHC11BP0C7U3 371 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 CCR10P46092 362 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 EML3Q32P44 896 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 VWA5B1Q5TIE3 1220 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 MBLAC2Q68D91 279 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 CNSTQ6PJW8 725 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 OMDQ99983 421 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 TXLNGQ9NUQ3 528 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 A0A0U1RQS6 177 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 T-ENOLP0DO92 83 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 RALBP11234 206 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 ARRB2P32121 409 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 SIRPB2Q5JXA9 342 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 CEP97Q8IW35 865 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 CD248Q9HCU0 757 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 ARL8BQ9NVJ2 186 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 MKS1Q9NXB0 559 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 AFF4Q9UHB7 1163 aaKnown RBP18.13■□□□□ 0.49
CAPN1-201ENST00000279247 MBL2P11226 248 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-201ENST00000279247 ARSDP51689 593 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 SMARCB1Q12824 385 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 RBM20Q5T481 1227 aaKnown RBP18.13■□□□□ 0.49
CAPN1-201ENST00000279247 NEPROQ6NW34 567 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 CNKSR3Q6P9H4 555 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 POTEHQ6S545 545 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 MFSD6LQ8IWD5 586 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 PARP9Q8IXQ6 854 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 PRICKLE1Q96MT3 831 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-201ENST00000279247 YME1L1Q96TA2 773 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 NMRAL1Q9HBL8 299 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF212Q9UDV6 495 aa18.13■□□□□ 0.49
CAPN1-201ENST00000279247 RUVBL2Q9Y230 463 aaKnown RBP18.13■□□□□ 0.49
CAPN1-201ENST00000279247 FAM95CA0A1B0GW59 222 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 STC2O76061 302 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 URODP06132 367 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 RAG1P15918 1043 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 GJA1P17302 382 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 MNAT1P51948 309 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 USP4Q13107 963 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 TXNDC8Q6A555 127 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 HDAC10Q969S8 669 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 MUC3BQ9H195 1237 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 HBS1LQ9Y450 684 aaKnown RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 ARL5AQ9Y689 179 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 COL4A4P53420 1690 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 DRGXA6NNA5 263 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 FCHO1O14526 889 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 SOD2P04179 222 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 RGRP47804 291 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 ARCN1P48444 511 aaKnown RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 PRAMEP78395 509 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 GNA12Q03113 381 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 RING1Q06587 406 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 HSF5Q4G112 596 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 SNX30Q5VWJ9 437 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 DNAJB7Q7Z6W7 309 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 TOP1MTQ969P6 601 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 RHOJQ9H4E5 214 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 THAP1Q9NVV9 213 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 PLK2Q9NYY3 685 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 FBXO5Q9UKT4 447 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 MTF2Q9Y483 593 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 CHD9Q3L8U1 2897 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 AP3B1O00203 1094 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 PTPRRQ15256 657 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 LRRC49Q8IUZ0 686 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 ARL14EPQ8N8R7 260 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 ARRDC2Q8TBH0 407 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 C2orf15Q8WU43 125 aaKnown RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 TSNARE1Q96NA8 513 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 POLR1EQ9GZS1 481 aaKnown RBP18.12■□□□□ 0.49
CAPN1-201ENST00000279247 ATP13A1Q9HD20 1204 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 DONSONQ9NYP3 566 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 CRYL1Q9Y2S2 319 aa18.12■□□□□ 0.49
CAPN1-201ENST00000279247 PAMP19021 973 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 SLC12A2P55011 1212 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 SMAD3P84022 425 aaKnown RBP18.11■□□□□ 0.49
CAPN1-201ENST00000279247 IL10RBQ08334 325 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 VEPH1Q14D04 833 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 PARP15Q460N3 678 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 NAPRTQ6XQN6 538 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 C7orf26Q96N11 449 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-201ENST00000279247 KLF11O14901 512 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 BIRC5O15392 142 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 ENO1P06733 434 aaKnown RBP18.11■□□□□ 0.49
CAPN1-201ENST00000279247 RHOCP08134 193 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 SYN1P17600 705 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms