RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 GLP2RO95838 553 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 AMHP03971 560 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 SOX6P35712 828 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF157P51786 506 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PRKAA2P54646 552 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CDH15P55291 814 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PGS1Q32NB8 556 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 SFT2D3Q587I9 215 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ARL13AQ5H913 290 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PRMT9Q6P2P2 845 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 GALNT18Q6P9A2 607 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 EID3Q8N140 333 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CXorf21Q9HAI6 301 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PARVBQ9HBI1 364 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 TBC1D13Q9NVG8 400 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 NR2E3Q9Y5X4 410 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 TRIM24O15164 1050 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ABL2P42684 1182 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 NOVP48745 357 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 RGS4P49798 205 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 RENBPP51606 427 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PRKD1Q15139 912 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PITRM1Q5JRX3 1037 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CACHD1Q5VU97 1274 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 SCARA3Q6AZY7 606 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 NDRG1Q92597 394 aaKnown RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ADAM7Q9H2U9 754 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 TMEM245Q9H330 911 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF541Q9H0D2 1346 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 MYH3P11055 1940 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CLUHO75153 1309 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 IL1R2P27930 398 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 IFNA8P32881 189 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 IDH3AP50213 366 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ST13P50502 369 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 HK2P52789 917 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TRAF3Q13114 568 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ANKS6Q68DC2 871 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 KLHDC10Q6PID8 442 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SPPL2CQ8IUH8 684 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 GPC2Q8N158 579 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TRPC4APQ8TEL6 797 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 UBASH3BQ8TF42 649 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SEC14L1Q92503 715 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 CD101Q93033 1021 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 AZIN2Q96A70 460 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 VPS33AQ96AX1 596 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TRIM39Q9HCM9 518 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ANKRD6Q9Y2G4 727 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 PHRF1Q9P1Y6 1649 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 MYOCOSA0A1B0GUC4 107 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 VPS26AO75436 327 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 CPSF4O95639 269 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 GUCA1CO95843 209 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 F7P08709 466 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 DBTP11182 482 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 CKMT2P17540 419 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ATP5F1P24539 256 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 POU5F1Q01860 360 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 MFSD10Q14728 455 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ARMCX4Q5H9R4 360 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 CERCAMQ5T4B2 595 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TMEM198Q66K66 360 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TLDC1Q6P9B6 456 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TLK2Q86UE8 772 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 STX19Q8N4C7 294 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 METTL6Q8TCB7 284 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 HTRA1Q92743 480 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SLC7A6OSQ96CW6 309 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 NXF3Q9H4D5 531 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 COQ10BQ9H8M1 238 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SSU72Q9NP77 194 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 NADKO95544 446 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TOP3BO95985 862 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 HGFP14210 728 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TFEBP19484 476 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 GPX6P59796 221 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 MSS51Q4VC12 460 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SPANXN2Q5MJ10 180 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 PIWIL4Q7Z3Z4 852 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SIX5Q8N196 739 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 DDX1Q92499 740 aaKnown RBP11.65□□□□□ -0.54
VPS33A-201ENST00000267199 ELMO1Q92556 727 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 COX4I2Q96KJ9 171 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 DEPDC7Q96QD5 511 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 FIZ1Q96SL8 496 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SDCBP2Q9H190 292 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 TUBGCP4Q9UGJ1 667 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 SLC8A2Q9UPR5 921 aa11.65□□□□□ -0.54
VPS33A-201ENST00000267199 MTF2Q9Y483 593 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms