RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PIK3R6Q5UE93 754 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TUBGCP5Q96RT8 1024 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ORC5O43913 435 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 NFKB1P19838 968 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 PITRM1Q5JRX3 1037 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CNSTQ6PJW8 725 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 PRR23BQ6ZRT6 265 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 HDAC7Q8WUI4 952 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ERGIC2Q96RQ1 377 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 SEMA4BQ9NPR2 832 aaPredicted RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 MALT1Q9UDY8 824 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 XIAPP98170 497 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 LDHDQ86WU2 507 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 UCMAQ8WVF2 138 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 CENPOQ9BU64 300 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 IFT46Q9NQC8 304 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 MNDAP41218 407 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 RAB27AP51159 221 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 ATG9AQ7Z3C6 839 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 TSEN15Q8WW01 171 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 CEP295NLQ96MC4 621 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 NOL11Q9H8H0 719 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 CRYL1Q9Y2S2 319 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 QRICH2Q9H0J4 1663 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 SHBGP04278 402 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 ACAT1P24752 427 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 WEE1P30291 646 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 STRIP1Q5VSL9 837 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 CLEC17AQ6ZS10 378 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 LRRC70Q7Z2Q7 622 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 FAM98AQ8NCA5 519 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 GPR156Q8NFN8 814 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 COL26A1Q96A83 441 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 PRKD2Q9BZL6 878 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 KCND2Q9NZV8 630 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 GSAPA4D1B5 854 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 TRMT11Q7Z4G4 463 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 POP1Q99575 1024 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 NEUROD4Q9HD90 331 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 AGPAT3Q9NRZ7 376 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 MAGEB16A2A368 324 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 KRT33AO76009 404 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 CST1P01037 141 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 PTGES3Q15185 160 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 RD3Q7Z3Z2 195 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 TDRD3Q9H7E2 651 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 MCIDASD6RGH6 385 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 G3V2T6 193 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 TIPRLO75663 272 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 LYNP07948 512 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 SNRPB2P08579 225 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 THEGLP0DJG4 465 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 GALNT3Q14435 633 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 ARHGAP15Q53QZ3 475 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 ELOA2Q8IYF1 753 aaPredicted RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 LACRTQ9GZZ8 138 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 FFAR3O14843 346 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 GPR42O15529 346 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 LRATO95237 230 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 BUD31P41223 144 aaPredicted RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 RPL6Q02878 288 aaKnown RBP11.25□□□□□ -0.61
CHFR-201ENST00000266880 SSX2Q16385 188 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 OAFQ86UD1 273 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 ARPC5LQ9BPX5 153 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 MYH1P12882 1939 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 MYH4Q9Y623 1939 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 FAM131BQ86XD5 332 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 SLC34A3Q8N130 599 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 FAM47BQ8NA70 645 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 TUBA1CQ9BQE3 449 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 KMOO15229 486 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 DHRS1Q96LJ7 313 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 AP3M1Q9Y2T2 418 aa11.25□□□□□ -0.61
CHFR-201ENST00000266880 OR1G1P47890 313 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 OGFOD2Q6N063 350 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ZNF571Q7Z3V5 609 aaPredicted RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 DNAJA4Q8WW22 397 aaPredicted RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 MTMR9Q96QG7 549 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 SPAG4Q9NPE6 437 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 NR4A1P22736 598 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 SCIMPQ6UWF3 145 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ACSL4O60488 711 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 RRM1P23921 792 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 RNF43Q68DV7 783 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms