RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MAGED2Q9UNF1 606 aaPredicted RBP12.6□□□□□ -0.39
BEST3-201ENST00000266661 PRSS51A0A1B0GVH4 220 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 MAFKO60675 156 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 TADA2AO75478 443 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 CYP2C18P33260 490 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 PSMD8P48556 350 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 DNAJB13P59910 316 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 RAB10P61026 200 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 COG7P83436 770 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SATB1Q01826 763 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 AFMIDQ63HM1 303 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 TMEM198Q66K66 360 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 ESRP1Q6NXG1 681 aaKnown RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 CHSY3Q70JA7 882 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 DENND6AQ8IWF6 608 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 PELI3Q8N2H9 469 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 RCN3Q96D15 328 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SMARCD1Q96GM5 515 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 CDRT15Q96T59 188 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 RHOBTB2Q9BYZ6 727 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 EPB41L1Q9H4G0 881 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SLC38A7Q9NVC3 462 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 PACSIN3Q9UKS6 424 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 INPP5FQ9Y2H2 1132 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 ACOT9Q9Y305 439 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 AAR2Q9Y312 384 aaKnown RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 TCAF1Q9Y4C2 921 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 TIMM13Q9Y5L4 95 aaPredicted RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 TRIP12Q14669 1992 aaPredicted RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 NUP205Q92621 2012 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SDHDO14521 159 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 MT-CYBP00156 380 aaPredicted RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 SMIM18P0DKX4 95 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 CLCNKBP51801 687 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 MPP1Q00013 466 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 FOLH1Q04609 750 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 ADGRE1Q14246 886 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 PDK3Q15120 406 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 TLR1Q15399 786 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 UGP2Q16851 508 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SH2D4BQ5SQS7 431 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 CD300LGQ6UXG3 332 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 RANBP10Q6VN20 620 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 BNC2Q6ZN30 1099 aaPredicted RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 EP400NLQ6ZTU2 488 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 LILRA2Q8N149 483 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 HAPLN3Q96S86 360 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 SERPINI1Q99574 410 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 FTHL17Q9BXU8 183 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 XPR1Q9UBH6 696 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 DTNAQ9Y4J8 743 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 COPG1Q9Y678 874 aaKnown RBP12.59□□□□□ -0.39
BEST3-201ENST00000266661 SLC4A7Q9Y6M7 1214 aa12.59□□□□□ -0.39
BEST3-201ENST00000266661 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CAPN8A6NHC0 703 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 NEMP1O14524 444 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 MATN3O15232 486 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 DNAJA2O60884 412 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 BCAS2O75934 225 aaPredicted RBP12.58□□□□□ -0.4
BEST3-201ENST00000266661 SNUPNO95149 360 aaKnown RBP12.58□□□□□ -0.4
BEST3-201ENST00000266661 VAPBO95292 243 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CYBAP13498 195 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CCL5P13501 91 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 AVPR1AP37288 418 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 GLRBP48167 497 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CLCN2P51788 898 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CHN2P52757 468 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 TAS2R39P59534 338 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CREB5Q02930 508 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CTBP1Q13363 440 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 ZNF460Q14592 562 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 MMEL1Q495T6 779 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 TIGD5Q53EQ6 642 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 ZFP1Q6P2D0 407 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 POTEHQ6S545 545 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 ST13P4Q8IZP2 240 aaPredicted RBP12.58□□□□□ -0.4
BEST3-201ENST00000266661 TXNDC5Q8NBS9 432 aaKnown RBP12.58□□□□□ -0.4
BEST3-201ENST00000266661 HMGCLL1Q8TB92 370 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 MYLPFQ96A32 169 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 DCUN1D1Q96GG9 259 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CATSPER2Q96P56 530 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 RNF208Q9H0X6 261 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 IGSF5Q9NSI5 407 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 SLC2A6Q9UGQ3 507 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CDYLQ9Y232 598 aa12.58□□□□□ -0.4
BEST3-201ENST00000266661 CCDC78A2IDD5 438 aa12.57□□□□□ -0.4
BEST3-201ENST00000266661 C17orf102A2RUQ5 167 aa12.57□□□□□ -0.4
BEST3-201ENST00000266661 IRAK2O43187 625 aa12.57□□□□□ -0.4
BEST3-201ENST00000266661 ANXA9O76027 345 aa12.57□□□□□ -0.4
BEST3-201ENST00000266661 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
BEST3-201ENST00000266661 GSTT1P30711 240 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms