RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 A0A0X1KG70 313 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 MAPK8P45983 427 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 CLCN5P51795 746 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNHIT3Q15649 155 aaPredicted RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 FAM20CQ8IXL6 584 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 PPP3R2Q96LZ3 170 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 MARCH2Q9P0N8 246 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 OR12D3Q9UGF7 316 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 SCAF8Q9UPN6 1271 aaKnown RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 TCRBV5S4A2TA0A5A2 114 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 HYIQ5T013 277 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 ANGPT4Q9Y264 503 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 FAM86B1E9PN63 330 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 SASH3O75995 380 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 SEC24AO95486 1093 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 FAM86B2P0C5J1 330 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 ATP4AP20648 1035 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 CCR4P51679 360 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF143P52747 638 aaPredicted RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 LGI2Q8N0V4 545 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 TRPV3Q8NET8 790 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 NELL1Q92832 810 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 SETD4Q9NVD3 440 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 VPS4AQ9UN37 437 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 IDH3BO43837 385 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 ANXA5P08758 320 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PRKAR1AP10644 381 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 CCNB1P14635 433 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 AGMOQ6ZNB7 445 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 TRAPPC5Q8IUR0 188 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 ZFP28Q8NHY6 868 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 CAPSLQ8WWF8 208 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PTPRHQ9HD43 1115 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 NCKAP1Q9Y2A7 1128 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 CHP2O43745 196 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PSEN1P49768 467 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 LRRC38Q5VT99 294 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PIWIL4Q7Z3Z4 852 aaKnown RBP17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PACS2Q86VP3 889 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PROSER1Q86XN7 944 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 SLC41A1Q8IVJ1 513 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 DNAJB3Q8WWF6 145 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 DKK3Q9UBP4 350 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 QSOX1O00391 747 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 CAPGP40121 348 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 NR1D2Q14995 579 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 R3HCC1LQ7Z5L2 792 aaKnown RBP17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 TBC1D10AQ9BXI6 508 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 XYLBO75191 536 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 RBL1P28749 1068 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 RAB10P61026 200 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 SNRPD1P62314 119 aaKnown RBP17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 MREGQ8N565 214 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 GMPPBQ9Y5P6 360 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 SNX3O60493 162 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PDK3Q15120 406 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 DHDDSQ86SQ9 333 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 IL1R1P14778 569 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 PABPC1LQ4VXU2 614 aaKnown RBP17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 BTN2A1Q7KYR7 527 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 OFCC1Q8IZS5 231 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 BPIFB6Q8NFQ5 453 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 WNT8BQ93098 351 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 REXO5Q96IC2 774 aaKnown RBP17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 NCANO14594 1321 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 CYP1A2P05177 515 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 KLRC2P26717 231 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 OLR1P78380 273 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 MTAPQ13126 283 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 TXNDC11Q6PKC3 985 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 LRMDAQ9H2I8 198 aa17.61■□□□□ 0.41
NOTCH3-201ENST00000263388 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 PRDM8Q9NQV8 689 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 KLQ9UEF7 1012 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 RPL26L1Q9UNX3 145 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CBFA2T3O75081 653 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 STXBP5Q5T5C0 1151 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 PORCNQ9H237 461 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 MCM8Q9UJA3 840 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 ATP5F1P24539 256 aaPredicted RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 PRKCIP41743 596 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CD86P42081 329 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 GCNT7Q6ZNI0 430 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 FAM71AQ8IYT1 594 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 ATP13A3Q9H7F0 1226 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CLK4Q9HAZ1 481 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 PRPF19Q9UMS4 504 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 POLD2P49005 469 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 RP9Q8TA86 221 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 FBXO30Q8TB52 745 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF670Q9BS34 389 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 TIMMDC1Q9NPL8 285 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF222Q9UK12 451 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 NFASCO94856 1347 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 LRRC14BA6NHZ5 514 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CDC40O60508 579 aaKnown RBP eCLIP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CDH8P55286 799 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms