RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IER5Q5VY09 327 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 TMEM135Q86UB9 458 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 ZBTB46Q86UZ6 589 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 ZMAT2Q96NC0 199 aaKnown RBP15.14■□□□□ 0.01
XRCC1-201ENST00000262887 PCYT2Q99447 389 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 C1orf50Q9BV19 199 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 TDRD1Q9BXT4 1180 aaKnown RBP15.14■□□□□ 0.01
XRCC1-201ENST00000262887 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 GIN1Q9NXP7 522 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 CCDC167Q9P0B6 97 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 RUVBL2Q9Y230 463 aaKnown RBP15.14■□□□□ 0.01
XRCC1-201ENST00000262887 B3GNT3Q9Y2A9 372 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 FIS1Q9Y3D6 152 aa15.14■□□□□ 0.01
XRCC1-201ENST00000262887 EIF3FO00303 357 aaPredicted RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 HSPA8P11142 646 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 HDCP19113 662 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 MAP4P27816 1152 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 ATICP31939 592 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 STAT5BP51692 787 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 CSE1LP55060 971 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 ZBTB17Q13105 803 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 NME3Q13232 169 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 GRM3Q14832 879 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 LAYNQ6UX15 382 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 PID1Q7Z2X4 250 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 FAM83AQ86UY5 434 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 PELI3Q8N2H9 469 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 KDM1BQ8NB78 822 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 OR2T34Q8NGX1 318 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 OR2T3Q8NH03 318 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 FAM110BQ8TC76 370 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 CYGBQ8WWM9 190 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 MAELQ96JY0 434 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 DNAI2Q9GZS0 605 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 CDT1Q9H211 546 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 IARS2Q9NSE4 1012 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 ATAD3AQ9NVI7 634 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 NCKIPSDQ9NZQ3 722 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 HACD3Q9P035 362 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 SFMBT1Q9UHJ3 866 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 ANKRD6Q9Y2G4 727 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 IGKV6D-21A0A0A0MT36 114 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 GOLGA8TH3BQL2 631 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 CCNA2P20248 432 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 AVPR1AP37288 418 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 GRIA3P42263 894 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 GNA12Q03113 381 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 INCA1Q0VD86 236 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 FASTKQ14296 549 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 MXD4Q14582 209 aaPredicted RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 DEPDC1Q5TB30 811 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 ZC3H7AQ8IWR0 971 aaKnown RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 COLGALT2Q8IYK4 626 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 FSTL5Q8N475 847 aaPredicted RBP15.13■□□□□ 0.01
XRCC1-201ENST00000262887 ANKRD52Q8NB46 1076 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 KCTD4Q8WVF5 259 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 C1QTNF1Q9BXJ1 281 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 C2orf40Q9H1Z8 148 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 VRTNQ9H8Y1 702 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 GTSE1Q9NYZ3 720 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 XPR1Q9UBH6 696 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 KIAA1257Q9ULG3 409 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 MGAMO43451 1857 aa15.13■□□□□ 0.01
XRCC1-201ENST00000262887 IQCA1LA6NCM1 817 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 ACKR2O00590 384 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 MMP10P09238 476 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 PTPN9P43378 593 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 CD300CQ08708 224 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 FSTL1Q12841 308 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 USP10Q14694 798 aaKnown RBP15.12■□□□□ 0.01
XRCC1-201ENST00000262887 NEDD8Q15843 81 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 TRIM16LQ309B1 348 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 AGKQ53H12 422 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 FAM117BQ6P1L5 589 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 GALNT18Q6P9A2 607 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 ABRAXAS1Q6UWZ7 409 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 STYXQ8WUJ0 223 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 ADAMTS10Q9H324 1103 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 SPO11Q9Y5K1 396 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 USP3Q9Y6I4 520 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 TRIP11Q15643 1979 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 C1orf232A0A0U1RR37 186 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 RNF103-CHMP3A0A140T963 221 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 CLOCKO15516 846 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 DLX3O60479 287 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 SRP72O76094 671 aaKnown RBP15.12■□□□□ 0.01
XRCC1-201ENST00000262887 GLUD2P49448 558 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 TBCELQ5QJ74 424 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 EPHX4Q8IUS5 362 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 HMGCLL1Q8TB92 370 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 CLEC4CQ8WTT0 213 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 OLFM1Q99784 485 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 MUC3BQ9H195 1237 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 RIC8BQ9NVN3 520 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 TMEM181Q9P2C4 612 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 KLHL8Q9P2G9 620 aaPredicted RBP15.12■□□□□ 0.01
XRCC1-201ENST00000262887 SEPT3Q9UH03 358 aa15.12■□□□□ 0.01
XRCC1-201ENST00000262887 AURKCQ9UQB9 309 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms