RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TUBP50607 506 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 ILKQ13418 452 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 CUL1Q13616 776 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 LLGL1Q15334 1064 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 SHBQ15464 509 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 CCNG2Q16589 344 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 ODF2Q5BJF6 829 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 TFDP3Q5H9I0 405 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 ZFYVE27Q5T4F4 411 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 SNX30Q5VWJ9 437 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 CCDC137Q6PK04 289 aaKnown RBP13.59□□□□□ -0.23
SGCA-201ENST00000262018 JAMLQ86YT9 394 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 CACTIN-AS1Q8N1I8 211 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 SCML4Q8N228 414 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 DCBLD1Q8N8Z6 715 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 FAM172AQ8WUF8 416 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 TEKT4Q8WW24 435 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 SLCO2A1Q92959 643 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 PEBP4Q96S96 227 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 TBCBQ99426 244 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 KLF16Q9BXK1 252 aaPredicted RBP13.59□□□□□ -0.23
SGCA-201ENST00000262018 HEMGNQ9BXL5 484 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 FUT8Q9BYC5 575 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 RAB17Q9H0T7 212 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 CNGB3Q9NQW8 809 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.59□□□□□ -0.23
SGCA-201ENST00000262018 ANKMY1Q9P2S6 941 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 PCSK1NQ9UHG2 260 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 RASAL2Q9UJF2 1139 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 FBXO10Q9UK96 956 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 UBR5O95071 2799 aaPredicted RBP13.59□□□□□ -0.23
SGCA-201ENST00000262018 COL12A1Q99715 3063 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 MAP2K7O14733 419 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 PRPSAP2O60256 369 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 TLR5O60602 858 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 TJP3O95049 919 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 TBX18O95935 607 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ZBED1O96006 694 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 MT-CO3P00414 261 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 MPOP05164 745 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 CARSP49589 748 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 PSEN1P49768 467 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ARSEP51690 589 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 DAOAP59103 153 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ATP11AP98196 1134 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 INSM1Q01101 510 aaPredicted RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 CDO1Q16878 200 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 RAB6CQ53S08 254 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 BOLA3Q53S33 107 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 DUPD1Q68J44 220 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 SERPINA13PQ6UXR4 307 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 STRADAQ7RTN6 431 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 HDXQ7Z353 690 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 GSPT2Q8IYD1 628 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 DEFB106AQ8N104 65 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ARHGAP18Q8N392 663 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 OR2T3Q8NH03 318 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 C1orf54Q8WWF1 131 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 SLC2A13Q96QE2 648 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ULBP1Q9BZM6 244 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 RAB6CQ9H0N0 254 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 VIPAS39Q9H9C1 493 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 TLR8Q9NR97 1041 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 R3HDM2Q9Y2K5 976 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 SLC27A6Q9Y2P4 619 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
SGCA-201ENST00000262018 PCDHB1Q9Y5F3 818 aa13.58□□□□□ -0.24
SGCA-201ENST00000262018 ESYT3A0FGR9 886 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 ZDHHC11BP0C7U3 371 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 CKMT2P17540 419 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 NOS2P35228 1153 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 HDAC4P56524 1084 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 YWHAZP63104 245 aaKnown RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 RACK1P63244 317 aaKnown RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 NNTQ13423 1086 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 EMBQ6PCB8 327 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 DRICH1Q6PGQ1 229 aaPredicted RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 ZNF574Q6ZN55 896 aaPredicted RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 BNIPLQ7Z465 357 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 VSIG1Q86XK7 387 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 NDRG1Q92597 394 aaKnown RBP13.57□□□□□ -0.24
SGCA-201ENST00000262018 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 NT5C3BQ969T7 300 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 P2RY11Q96G91 374 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms