RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 DUSP10Q9Y6W6 482 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 A0A1B0GTW7 788 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 LNP1A1A4G5 178 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 LRRD1A4D1F6 860 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 C3orf70A6NLC5 250 aaPredicted RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 C16orf96A6NNT2 1141 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 GOLGA6L6A8MZA4 724 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 C10orf142B7Z368 130 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 INSIG1O15503 277 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PJA2O43164 708 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 SPOPO43791 374 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 MAFKO60675 156 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 MAP3K6O95382 1288 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PEX11BO96011 259 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 CFIP05156 583 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 UGT2B4P06133 528 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 GNSP15586 552 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 ENGP17813 658 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 CD27P26842 260 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 SERPINB6P35237 376 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 HOXD12P35452 270 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 RGRP47804 291 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 CCR5P51681 352 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 VAV2P52735 878 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PPP2CBP62714 309 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PPP2CAP67775 309 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 FOXK2Q01167 660 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 RAD51Q06609 339 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 SLC10A7Q0GE19 358 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 CCDC15Q0P6D6 951 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 LBRQ14739 615 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PAFAH1B3Q15102 231 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 RSPO4Q2I0M5 234 aaPredicted RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 LRRC38Q5VT99 294 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 FBXL19Q6PCT2 694 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 ERN2Q76MJ5 926 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PARS2Q7L3T8 475 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 RABEPKQ7Z6M1 372 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 ZCCHC9Q8N567 271 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 PQLC3Q8N755 202 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 TSEN2Q8NCE0 465 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 FAF2Q96CS3 445 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 LRIG1Q96JA1 1093 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 KLHL32Q96NJ5 620 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 HDAC8Q9BY41 377 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 CPEB1Q9BZB8 566 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 DDX56Q9NY93 547 aaKnown RBP8.64□□□□□ -1.03
TMEM258-201ENST00000257262 SUSD2Q9UGT4 822 aa8.64□□□□□ -1.03
TMEM258-201ENST00000257262 SHROOM3Q8TF72 1996 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 PCDH15Q96QU1 1955 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ANKRD36A6QL64 1941 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 A0A0U1RQJ8 604 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 A0A1W2PPC4 97 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 BTNL10A8MVZ5 291 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 CDX4O14627 284 aaPredicted RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 WNT9AO14904 365 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 MUSKO15146 869 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 BCAT2O15382 392 aaPredicted RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 MFSD11O43934 449 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 RNGTTO60942 597 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 GJB3O75712 270 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 KRT1P04264 644 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ADRB3P13945 408 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ITGB7P26010 798 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 MAT2AP31153 395 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ID4P47928 161 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 CSNK1DP48730 415 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 CSNK1EP49674 416 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 NEK3P51956 506 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 NAP1L1P55209 391 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 GSDMDP57764 484 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 NSUN2Q08J23 767 aaKnown RBP eCLIP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 SLC10A2Q12908 348 aaPredicted RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ODF2Q5BJF6 829 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ZNF805Q5CZA5 627 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 STPG1Q5TH74 334 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 MFSD7Q6UXD7 560 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 DAAM2Q86T65 1068 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 KIAA1328Q86T90 577 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 SRLQ86TD4 932 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 PRPF39Q86UA1 669 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 RMDN1Q96DB5 314 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 CALR3Q96L12 384 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ZNF599Q96NL3 588 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 ORAI3Q9BRQ5 295 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 DESI2Q9BSY9 194 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 EDEM2Q9BV94 578 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 CINPQ9BW66 212 aaPredicted RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 GTPBP2Q9BX10 602 aaKnown RBP8.63□□□□□ -1.03
TMEM258-201ENST00000257262 OSBPL1AQ9BXW6 950 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 GRPEL1Q9HAV7 217 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 CAPN10Q9HC96 672 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 PREBQ9HCU5 417 aa8.63□□□□□ -1.03
TMEM258-201ENST00000257262 TM9SF3Q9HD45 589 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms