RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 OXNAD1Q96HP4 312 aaPredicted RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 LRIG1Q96JA1 1093 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 FEM1CQ96JP0 617 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.31
LSM8-201ENST00000249299 SEMA3CQ99985 751 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 HINFPQ9BQA5 517 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 MLPHQ9BV36 600 aaPredicted RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 CPEB1Q9BZB8 566 aaKnown RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 NEUROG2Q9H2A3 272 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 LHX3Q9UBR4 397 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 RPL26L1Q9UNX3 145 aaKnown RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 REV3LO60673 3130 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 MUSKO15146 869 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 SPAG6O75602 509 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 KAT7O95251 611 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 POP4O95707 220 aaKnown RBP13.1□□□□□ -0.31
LSM8-201ENST00000249299 MT-CO1P00395 513 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 MMP2P08253 660 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 GSTA2P09210 222 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 SRFP11831 508 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 HNRNPLP14866 589 aaKnown RBP eCLIP13.1□□□□□ -0.31
LSM8-201ENST00000249299 HLA-DPA1P20036 260 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 WNT3AP56704 352 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 NIPAL4Q0D2K0 466 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 CDH17Q12864 832 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 TDGQ13569 410 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 LAMB3Q13751 1172 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 C22orf39Q6P5X5 142 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 FBXO38Q6PIJ6 1188 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 LINGO4Q6UY18 593 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
LSM8-201ENST00000249299 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 ADHFE1Q8IWW8 467 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 ZNF641Q96N77 438 aaPredicted RBP13.1□□□□□ -0.31
LSM8-201ENST00000249299 FSD1LQ9BXM9 530 aa13.1□□□□□ -0.31
LSM8-201ENST00000249299 TCRBV7S3A2A0A539 114 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 TBC1D3BA6NDS4 549 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 SDR42E2A6NKP2 422 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 ZNF821O75541 412 aaPredicted RBP13.09□□□□□ -0.31
LSM8-201ENST00000249299 FGF1P05230 155 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 FAM153BP0C7A2 387 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 ALADP13716 330 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CTHP32929 405 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CD86P42081 329 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
LSM8-201ENST00000249299 SLC6A11P48066 632 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 SCNN1BP51168 640 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 DSC2Q02487 901 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CDK18Q07002 472 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 DHX9Q08211 1270 aaKnown RBP13.09□□□□□ -0.31
LSM8-201ENST00000249299 ENPP2Q13822 863 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 DLG2Q15700 870 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 PTPRNQ16849 979 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 FAM153CQ494X1 144 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CCDC38Q502W7 563 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CARD16Q5EG05 197 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CYS1Q717R9 158 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 SRLQ86TD4 932 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 SPATA22Q8NHS9 363 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 PEX13Q92968 403 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 MRGPRX2Q96LB1 330 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 P2RY13Q9BPV8 354 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 C19orf43Q9BQ61 176 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 TBL1YQ9BQ87 522 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 ADGRE3Q9BY15 652 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 IL22Q9GZX6 179 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
LSM8-201ENST00000249299 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 VIPAS39Q9H9C1 493 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 NOD2Q9HC29 1040 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 BFARQ9NZS9 450 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 NYNRINQ9P2P1 1898 aaKnown RBP13.09□□□□□ -0.31
LSM8-201ENST00000249299 THAP10Q9P2Z0 257 aaPredicted RBP13.09□□□□□ -0.31
LSM8-201ENST00000249299 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
LSM8-201ENST00000249299 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 SPECC1L-ADORA2AF8WAN1 911 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 MAN2B1O00754 1011 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 HTRA2O43464 458 aaPredicted RBP13.08□□□□□ -0.32
LSM8-201ENST00000249299 SMAD6O43541 496 aaKnown RBP13.08□□□□□ -0.32
LSM8-201ENST00000249299 TTC4O95801 387 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 NDST3O95803 873 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.32
LSM8-201ENST00000249299 ABHD2P08910 425 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 DRD1P21728 446 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 MAGEA4P43358 317 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 MAXP61244 160 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms