RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CACNG3O60359 315 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 ODC1P11926 461 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 UQCRBP14927 111 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 GRIK1P39086 918 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 ITKQ08881 620 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 FLOT2Q14254 428 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 FAM171BQ6P995 826 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 GK5Q6ZS86 529 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 SCN4BQ8IWT1 228 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 PHF21BQ96EK2 531 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 TSGA13Q96PP4 275 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 IL12RB2Q99665 862 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 STK39Q9UEW8 545 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 FBXO5Q9UKT4 447 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 MATN3O15232 486 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 CELF2O95319 508 aaKnown RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 APOA4P06727 396 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 GRIA2P42262 883 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 ALDH1A3P47895 512 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 COG7P83436 770 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 HNRNPDQ14103 355 aaKnown RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 ARTNQ5T4W7 220 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 PTAR1Q7Z6K3 402 aaPredicted RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 COPS7BQ9H9Q2 264 aaPredicted RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 H2AFYO75367 372 aaKnown RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 SLC30A9Q6PML9 568 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 BNC2Q6ZN30 1099 aaPredicted RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 TRIM67Q6ZTA4 783 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 SCD5Q86SK9 330 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 PCDH20Q8N6Y1 951 aaKnown RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 KATNAL1Q9BW62 490 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 OSER1Q9NX31 292 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 FESP07332 822 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 ETS2P15036 469 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 PPP1R3AQ16821 1122 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 ZNF423Q2M1K9 1284 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 WDR41Q9HAD4 459 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 SPATS2LQ9NUQ6 558 aaKnown RBP25.81■■□□□ 1.72
RAB40C-201ENST00000248139 ARHGEF38Q9NXL2 777 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 PDP2Q9P2J9 529 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 MID2Q9UJV3 735 aa25.81■■□□□ 1.72
RAB40C-201ENST00000248139 GJB3O75712 270 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 ANXA9O76027 345 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 IGLV3-25P01717 112 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 ADRA1AP35348 466 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 IHHQ14623 411 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 TAF2Q6P1X5 1199 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 BHLHE22Q8NFJ8 381 aaPredicted RBP25.8■■□□□ 1.72
RAB40C-201ENST00000248139 RP9Q8TA86 221 aaKnown RBP25.8■■□□□ 1.72
RAB40C-201ENST00000248139 ACBD6Q9BR61 282 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 HS3ST4Q9Y661 456 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 KCNU1A8MYU2 1149 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 J3KR12 359 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 CD151P48509 253 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 GPR15P49685 360 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 FOLH1Q04609 750 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 ART3Q13508 389 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 OVOS1Q6IE37 1185 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 NEPROQ6NW34 567 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 PQLC1Q8N2U9 271 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 RDH11Q8TC12 318 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 GPR152Q8TDT2 470 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 CNDP1Q96KN2 507 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 MRPL46Q9H2W6 279 aaKnown RBP25.8■■□□□ 1.72
RAB40C-201ENST00000248139 ZNF385DQ9H6B1 395 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 PADI3Q9ULW8 664 aa25.8■■□□□ 1.72
RAB40C-201ENST00000248139 OR51F1A6NGY5 319 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 FAM163BP0C2L3 166 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 HOXC8P31273 242 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 SLC12A2P55011 1212 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 WNT3AP56704 352 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 GK3PQ14409 553 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 PIGGQ5H8A4 983 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 RASIP1Q5U651 963 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 METTL23Q86XA0 190 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 TRPV1Q8NER1 839 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 ZBTB26Q9HCK0 441 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 NT5MQ9NPB1 228 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 ZDHHC7Q9NXF8 308 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 IPO11Q9UI26 975 aaKnown RBP25.79■■□□□ 1.72
RAB40C-201ENST00000248139 DTNAQ9Y4J8 743 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 NYNRINQ9P2P1 1898 aaKnown RBP25.79■■□□□ 1.72
RAB40C-201ENST00000248139 A0A1W2PQH9 124 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 E9PAM4 449 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 CPB1P15086 417 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 CCR1P32246 355 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 HADHAP40939 763 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 IRX1P78414 480 aaPredicted RBP25.79■■□□□ 1.72
RAB40C-201ENST00000248139 C16orf89Q6UX73 402 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 CNTN4Q8IWV2 1026 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 LILRA2Q8N149 483 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 NSMCE4AQ9NXX6 385 aa25.79■■□□□ 1.72
RAB40C-201ENST00000248139 ZNF236Q9UL36 1845 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 SDHDO14521 159 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 THPOP40225 353 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 EIF4EBP2Q13542 120 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-201ENST00000248139 UGP2Q16851 508 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 RANBP10Q6VN20 620 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 ZNF354CQ86Y25 554 aa25.78■■□□□ 1.72
RAB40C-201ENST00000248139 ANKRD49Q8WVL7 239 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms