RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 MID2Q9UJV3 735 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 NUDT5Q9UKK9 219 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 PCDHB12Q9Y5F1 795 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 XIRP2A4UGR9 3374 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 KIAA1671Q9BY89 1806 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 TMEM114B3SHH9 223 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 SPECC1L-ADORA2AF8WAN1 911 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 G3V2L1 256 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ZNF195O14628 629 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 H2AFYO75367 372 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 VNN2O95498 520 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ENO1P06733 434 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 LAG3P18627 525 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 YWHAQP27348 245 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ADRA1AP35348 466 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 MLLT6P55198 1093 aaPredicted RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ANO4Q32M45 955 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 DENND5AQ6IQ26 1287 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 MSANTD2Q6P1R3 559 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RFWD3Q6PCD5 774 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ATG14Q6ZNE5 492 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ZC3HC1Q86WB0 502 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RNF168Q8IYW5 571 aaPredicted RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RTL3Q8N8U3 475 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 GIMAP7Q8NHV1 300 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 SPATA17Q96L03 361 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ASB2Q96Q27 587 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 RHOJQ9H4E5 214 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ENTPD7Q9NQZ7 604 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 ZNF358Q9NW07 568 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 OSER1Q9NX31 292 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 APOBEC2Q9Y235 224 aaKnown RBP12.86□□□□□ -0.35
SNAI1-201ENST00000244050 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
SNAI1-201ENST00000244050 TRANK1O15050 2925 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SHROOM3Q8TF72 1996 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 E9PAM4 449 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 ADAM12O43184 909 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SIN3BO75182 1162 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 ENTPD5O75356 428 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SOD2P04179 222 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SLC2A3P11169 496 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 ARRB2P32121 409 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 OR1D2P34982 312 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 GCKP35557 465 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 PGM1P36871 562 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 TUBP50607 506 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 UGP2Q16851 508 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 DNAL1Q4LDG9 190 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 CMTR2Q8IYT2 770 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SPATA22Q8NHS9 363 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 RDH11Q8TC12 318 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SREK1Q8WXA9 508 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 FATE1Q969F0 183 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SLC39A13Q96H72 371 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 MTIF3Q9H2K0 278 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 YY1AP1Q9H869 796 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 SLC28A3Q9HAS3 691 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 RC3H2Q9HBD1 1191 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 NMRAL1Q9HBL8 299 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 IL37Q9NZH6 218 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 PLA2G4CQ9UP65 541 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 LRRC42Q9Y546 428 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 HS3ST4Q9Y661 456 aa12.85□□□□□ -0.35
SNAI1-201ENST00000244050 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
SNAI1-201ENST00000244050 FAM92AA1XBS5 289 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 PRR5-ARHGAP8B1AHC4 643 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 TRIM13O60858 407 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 MT-CYBP00156 380 aaPredicted RBP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 COL6A2P12110 1019 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 IGFBP4P22692 258 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 ARCN1P48444 511 aaKnown RBP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 PSEN1P49768 467 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 IDH3AP50213 366 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 PRKAA2P54646 552 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 ALDH18A1P54886 795 aaKnown RBP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 ARHGAP8P85298 464 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 TAF10Q12962 218 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 GRM3Q14832 879 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 KHDC1Q4VXA5 237 aaKnown RBP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 MAVSQ7Z434 540 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.359e-7■■■■■ 51.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms