RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 CNTN1Q12860 1018 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 KLF1Q13351 362 aaPredicted RBP19.5■□□□□ 0.71
CENPA-201ENST00000233505 ZNF211Q13398 564 aaPredicted RBP19.5■□□□□ 0.71
CENPA-201ENST00000233505 LLGL1Q15334 1064 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 ZNF805Q5CZA5 627 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 GDPD4Q6W3E5 623 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 ERN2Q76MJ5 926 aaKnown RBP19.5■□□□□ 0.71
CENPA-201ENST00000233505 GANCQ8TET4 914 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 SPOCK2Q92563 424 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 FOXJ1Q92949 421 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 ARRDC3Q96B67 414 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 QKIQ96PU8 341 aaKnown RBP eCLIP19.5■□□□□ 0.712e-15■■■■■ 38.6
CENPA-201ENST00000233505 NUDCD1Q96RS6 583 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 IL12RB2Q99665 862 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 TLR10Q9BXR5 811 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 NEUROG2Q9H2A3 272 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 ATP13A3Q9H7F0 1226 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 PYCARDQ9ULZ3 195 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 PCDHGA5Q9Y5G8 931 aa19.5■□□□□ 0.71
CENPA-201ENST00000233505 MTSS1O43312 755 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 PLRG1O43660 514 aaKnown RBP19.49■□□□□ 0.71
CENPA-201ENST00000233505 EPN2O95208 641 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 UGT2B4P06133 528 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 MSNP26038 577 aaKnown RBP19.49■□□□□ 0.71
CENPA-201ENST00000233505 ACSL1P33121 698 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 DPP6P42658 865 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 SUOXP51687 545 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 NEK3P51956 506 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 ADPRHP54922 357 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 NOMO1Q15155 1222 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 PIP5KL1Q5T9C9 394 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 SEL1L2Q5TEA6 688 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 CCDC181Q5TID7 509 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 AADACL2Q6P093 401 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 FAM124AQ86V42 546 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 PGBD5Q8N414 524 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 TTC13Q8NBP0 860 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 OR2T34Q8NGX1 318 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 TFB1MQ8WVM0 346 aaKnown RBP19.49■□□□□ 0.71
CENPA-201ENST00000233505 RAB7BQ96AH8 199 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 POLR1EQ9GZS1 481 aaKnown RBP19.49■□□□□ 0.71
CENPA-201ENST00000233505 KCND1Q9NSA2 647 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 RBM22Q9NW64 420 aaKnown RBP eCLIP19.49■□□□□ 0.71
CENPA-201ENST00000233505 SAE1Q9UBE0 346 aaPredicted RBP19.49■□□□□ 0.71
CENPA-201ENST00000233505 JRKLQ9Y4A0 524 aa19.49■□□□□ 0.71
CENPA-201ENST00000233505 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.48■□□□□ 0.71
CENPA-201ENST00000233505 LRRC72A6NJI9 287 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 RNF103O00237 685 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 INSIG1O15503 277 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 KIF5CO60282 957 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 SOCS5O75159 536 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 RETP07949 1114 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 SERPINA4P29622 427 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 GKP32189 559 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 HOXD12P35452 270 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 AP1B1Q10567 949 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 NCEH1Q6PIU2 408 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 PARS2Q7L3T8 475 aaKnown RBP19.48■□□□□ 0.71
CENPA-201ENST00000233505 ACTL9Q8TC94 416 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 GPR174Q9BXC1 333 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 PREBQ9HCU5 417 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 NT5MQ9NPB1 228 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 ATP8A1Q9Y2Q0 1164 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 PLXND1Q9Y4D7 1925 aa19.48■□□□□ 0.71
CENPA-201ENST00000233505 NYNRINQ9P2P1 1898 aaKnown RBP19.48■□□□□ 0.71
CENPA-201ENST00000233505 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 A0A1W2PQ67 120 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 C16orf96A6NNT2 1141 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 KCNK1O00180 336 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 KCNK3O14649 394 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 AP1G1O43747 822 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 ADRB3P13945 408 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 SCNN1BP51168 640 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 OTUD4Q01804 1114 aaKnown RBP19.47■□□□□ 0.71
CENPA-201ENST00000233505 BCL2L1Q07817 233 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 POM121L1PQ3SYA9 428 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 SLC45A4Q5BKX6 768 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 LYSMD4Q5XG99 296 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 NEK5Q6P3R8 708 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 BRAT1Q6PJG6 821 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.47■□□□□ 0.71
CENPA-201ENST00000233505 ZSCAN30Q86W11 494 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 SLC41A1Q8IVJ1 513 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 TMEFF1Q8IYR6 380 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 HAUS1Q96CS2 278 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 ECHDC3Q96DC8 303 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 KLHL32Q96NJ5 620 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 HINFPQ9BQA5 517 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 SUV39H2Q9H5I1 410 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 TRMT1Q9NXH9 659 aaKnown RBP19.47■□□□□ 0.71
CENPA-201ENST00000233505 GMEB2Q9UKD1 530 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.47■□□□□ 0.71
CENPA-201ENST00000233505 OTOGLQ3ZCN5 2332 aa19.47■□□□□ 0.71
CENPA-201ENST00000233505 FRYLO94915 3013 aa19.46■□□□□ 0.71
CENPA-201ENST00000233505 METTL12A8MUP2 240 aa19.46■□□□□ 0.71
CENPA-201ENST00000233505 LRP3O75074 770 aa19.46■□□□□ 0.71
CENPA-201ENST00000233505 NEBLO76041 1014 aa19.46■□□□□ 0.71
CENPA-201ENST00000233505 JCHAINP01591 159 aa19.46■□□□□ 0.71
CENPA-201ENST00000233505 HLA-DQB2P05538 268 aa19.46■□□□□ 0.71
CENPA-201ENST00000233505 CCR5P51681 352 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms