RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ZFATQ9P243 1243 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 VPS51Q9UID3 782 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 ARIH1Q9Y4X5 557 aaPredicted RBP16.99■□□□□ 0.31
TVP23C-201ENST00000225576 GBF1Q92538 1859 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 FAM47DPA6NHR8 397 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 INSIG1O15503 277 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 UGT1A9O60656 530 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 TMCC1O94876 653 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 PENKP01210 267 aaPredicted RBP16.98■□□□□ 0.31
TVP23C-201ENST00000225576 ATXN1LP0C7T5 689 aaKnown RBP16.98■□□□□ 0.31
TVP23C-201ENST00000225576 ERVK-10P10266 1014 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 KRT4P19013 534 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 GBP2P32456 591 aaPredicted RBP16.98■□□□□ 0.31
TVP23C-201ENST00000225576 LMAN2Q12907 356 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 DNAJC3Q13217 504 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 MPP2Q14168 576 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 POU6F1Q14863 301 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 SIRPB2Q5JXA9 342 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 RETSATQ6NUM9 610 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 RASSF3Q86WH2 238 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 ARID3BQ8IVW6 561 aaPredicted RBP16.98■□□□□ 0.31
TVP23C-201ENST00000225576 C12orf76Q8N812 135 aaPredicted RBP16.98■□□□□ 0.31
TVP23C-201ENST00000225576 VN1R2Q8NFZ6 395 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
TVP23C-201ENST00000225576 BHMTQ93088 406 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 IFT43Q96FT9 208 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 LMLNQ96KR4 655 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 KIF9Q9HAQ2 790 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 UGT1A7Q9HAW7 530 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 UGT1A10Q9HAW8 530 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 UGT1A8Q9HAW9 530 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 NOD2Q9HC29 1040 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 DZANK1Q9NVP4 752 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 NKIRAS1Q9NYS0 192 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 PLK2Q9NYY3 685 aa16.98■□□□□ 0.31
TVP23C-201ENST00000225576 HEATR9A2RTY3 570 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 EPOPA6NHQ4 379 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 TRIM49D1C9J1S8 452 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 SLC9A3R1O14745 358 aaPredicted RBP16.97■□□□□ 0.31
TVP23C-201ENST00000225576 TYROBPO43914 113 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 GJB3O75712 270 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 FGF1P05230 155 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 RGRP47804 291 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 SCNN1BP51168 640 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 RALGPS1Q5JS13 557 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 PDPK2PQ6A1A2 396 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 LINGO4Q6UY18 593 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 PACS1Q6VY07 963 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 TIFABQ6ZNK6 161 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 SH2D5Q6ZV89 423 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 APCDD1Q8J025 514 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 C4orf33Q8N1A6 199 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 ZNF557Q8N988 423 aaPredicted RBP16.97■□□□□ 0.31
TVP23C-201ENST00000225576 ITFG1Q8TB96 612 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 IRF7Q92985 503 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 PPP2R3CQ969Q6 453 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 MRPL38Q96DV4 380 aaKnown RBP16.97■□□□□ 0.31
TVP23C-201ENST00000225576 SGSM3Q96HU1 749 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 ZNF778Q96MU6 729 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 CPNE1Q99829 537 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 SCUBE2Q9NQ36 999 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 TREX1Q9NSU2 369 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 LHX3Q9UBR4 397 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 CLEC4EQ9ULY5 219 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 NOTCH4Q99466 2003 aa16.97■□□□□ 0.31
TVP23C-201ENST00000225576 PAPSS2O95340 614 aaPredicted RBP16.96■□□□□ 0.31
TVP23C-201ENST00000225576 NDST3O95803 873 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 PAMP19021 973 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 GP5P40197 560 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 PPARDQ03181 441 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 SLC18A2Q05940 514 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 SLC20A2Q08357 652 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 LAMB3Q13751 1172 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 CBX2Q14781 532 aaPredicted RBP16.96■□□□□ 0.31
TVP23C-201ENST00000225576 PLEKHG6Q3KR16 790 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 TEDDM1Q5T9Z0 273 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 GRTP1Q5TC63 336 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 TMC5Q6UXY8 1006 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 NLRP9Q7RTR0 991 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 METTL3Q86U44 580 aaKnown RBP16.96■□□□□ 0.31
TVP23C-201ENST00000225576 KCNMB4Q86W47 210 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 TMEM25Q86YD3 366 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 CELF5Q8N6W0 485 aaKnown RBP16.96■□□□□ 0.31
TVP23C-201ENST00000225576 TRIB3Q96RU7 358 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 CCDC134Q9H6E4 229 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 C20orf96Q9NUD7 363 aaPredicted RBP16.96■□□□□ 0.31
TVP23C-201ENST00000225576 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
TVP23C-201ENST00000225576 HMX2A2RU54 273 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 SPAG7O75391 227 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 ALADP13716 330 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 CD70P32970 193 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 KIAA0930Q6ICG6 404 aaPredicted RBP16.96■□□□□ 0.3
TVP23C-201ENST00000225576 TMEM184AQ6ZMB5 413 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 ADGRG2Q8IZP9 1017 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 ANKRD42Q8N9B4 389 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 BANPQ8N9N5 519 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 DENND1AQ8TEH3 1009 aa16.96■□□□□ 0.3
TVP23C-201ENST00000225576 SERAC1Q96JX3 654 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms