RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 GPAT3Q53EU6 434 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 GCNT7Q6ZNI0 430 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 NELL1Q92832 810 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 PWWP2AQ96N64 755 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 C2orf49Q9BVC5 232 aaPredicted RBP18.01■□□□□ 0.47
EXTL3-201ENST00000220562 SLC28A1O00337 649 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 RECQL5O94762 991 aaPredicted RBP18.01■□□□□ 0.47
EXTL3-201ENST00000220562 FSBPO95073 299 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 MARCKSL1P49006 195 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 SH3BP5LQ7L8J4 393 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 CYP3A7-CYP3A51PA0A087WV96 503 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 BTNL10A8MVZ5 291 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 SNUPNO95149 360 aaKnown RBP18.01■□□□□ 0.47
EXTL3-201ENST00000220562 TFEBP19484 476 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 CYP3A7P24462 503 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 TNK2Q07912 1038 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 COLGALT2Q8IYK4 626 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 SLC4A5Q9BY07 1137 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 ZNHIT2Q9UHR6 403 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 LRRC38Q5VT99 294 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 TOR4AQ9NXH8 423 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 FBXL21Q9UKT6 434 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 EPHB6O15197 1021 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 VEGFAP15692 232 aaPredicted RBP18.01■□□□□ 0.47
EXTL3-201ENST00000220562 RPL38P63173 70 aaKnown RBP18.01■□□□□ 0.47
EXTL3-201ENST00000220562 KCTD21Q4G0X4 260 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 SPAG4Q9NPE6 437 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 EHD3Q9NZN3 535 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 CLDN5O00501 218 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 MEIS2O14770 477 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 TTPAP49638 278 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 CAPSQ13938 189 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 SCIMPQ6UWF3 145 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 CAMK1DQ8IU85 385 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 ADCY6O43306 1168 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 SP100P23497 879 aaPredicted RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 IDH2P48735 452 aaKnown RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 MARSP56192 900 aaKnown RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 RNASE11Q8TAA1 199 aaKnown RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 SOHLH2Q9NX45 425 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 LEF1Q9UJU2 399 aaPredicted RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 RPS6KA6Q9UK32 745 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 hCG_1818297A0A087WSY0 165 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 GPR1P46091 355 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 INTS11Q5TA45 600 aaKnown RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 PHF13Q86YI8 300 aaPredicted RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 LRRC19Q9H756 370 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 SLC27A5Q9Y2P5 690 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 ATXN2Q99700 1313 aaKnown RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 KLRC4O43908 158 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 SNX3O60493 162 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 ABHD2P08910 425 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 LINC00032P0C843 101 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 PSME3P61289 254 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 BIKQ13323 160 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 LYPLAL1Q5VWZ2 237 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 TTC7BQ86TV6 843 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 SAPCD2Q86UD0 394 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 FUKQ8N0W3 1084 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 TM6SF2Q9BZW4 377 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 ATP13A3Q9H7F0 1226 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 UBIAD1Q9Y5Z9 338 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 TMEM191CA6NGB0 347 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 IFNA16P05015 189 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 CDT1Q9H211 546 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 CLN6Q9NWW5 311 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 ZNF232Q9UNY5 417 aa18■□□□□ 0.47
EXTL3-201ENST00000220562 RIMS1Q86UR5 1692 aaKnown RBP18■□□□□ 0.47
EXTL3-201ENST00000220562 TRIM32Q13049 653 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 MZT2AQ6P582 158 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 PIGZQ86VD9 579 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 OFCC1Q8IZS5 231 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 RTL3Q8N8U3 475 aaKnown RBP17.99■□□□□ 0.47
EXTL3-201ENST00000220562 EIF1ADQ8N9N8 165 aaKnown RBP17.99■□□□□ 0.47
EXTL3-201ENST00000220562 S100A13Q99584 98 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 MRPL57Q9BQC6 102 aaKnown RBP17.99■□□□□ 0.47
EXTL3-201ENST00000220562 CORO1BQ9BR76 489 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 HIST1H2ABP04908 130 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 CCNA2P20248 432 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 TLX1P31314 330 aaPredicted RBP17.99■□□□□ 0.47
EXTL3-201ENST00000220562 SKP1P63208 163 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 XKR6Q5GH73 641 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 SDHAF4Q5VUM1 108 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 KIAA0408Q6ZU52 694 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 HIST3H2AQ7L7L0 130 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 ANKRD52Q8NB46 1076 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 OR52L1Q8NGH7 329 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 HIST1H2ACQ93077 130 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 TINF2Q9BSI4 451 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 C1orf50Q9BV19 199 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 VPS4AQ9UN37 437 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 PPIEQ9UNP9 301 aaKnown RBP17.99■□□□□ 0.47
EXTL3-201ENST00000220562 MAGEC1O60732 1142 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 PIAS1O75925 651 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 PAX7P23759 505 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 MAXP61244 160 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 COPZ1P61923 177 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 CXCL17Q6UXB2 119 aa17.99■□□□□ 0.47
EXTL3-201ENST00000220562 LRRC55Q6ZSA7 311 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms