RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 C12orf29Q8N999 325 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ACP6Q9NPH0 428 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 SMIM31A0A1B0GVY4 71 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 CLDN11O75508 207 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 MYBL2P10244 700 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 MYL12AP19105 171 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 TAF10Q12962 218 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 HSDL1Q3SXM5 330 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 CDC73Q6P1J9 531 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 KRT77Q7Z794 578 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ADAMTSL2Q86TH1 951 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 C7orf61Q8IZ16 206 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 VPS45Q9NRW7 570 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 L1RE1Q9UN81 338 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 KCNE2Q9Y6J6 123 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 KRT33AO76009 404 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 HLA-DQA2P01906 255 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 MAXP61244 160 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 AP5B1Q2VPB7 878 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 PPP1R26Q5T8A7 1209 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 LBX2Q6XYB7 198 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 C12orf50Q8NA57 414 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 HEXDCQ8WVB3 486 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 RMND5BQ96G75 393 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 CEP44Q9C0F1 390 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 PALMDQ9NP74 551 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 BCLAF3A2AJT9 711 aaKnown RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 CD3EAPO15446 510 aaKnown RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ULK1O75385 1050 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 KCNH1O95259 989 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 FGF1P05230 155 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 AIF1P55008 147 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 PRMT2P55345 433 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 UGCGQ16739 394 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 CRY2Q49AN0 593 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 SAMD4BQ5PRF9 694 aaKnown RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ZCCHC23Q6ZST2 131 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ITFG1Q8TB96 612 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 SHC3Q92529 594 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ZBTB10Q96DT7 871 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 OXNAD1Q96HP4 312 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 TBCDQ9BTW9 1192 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 PCDHA11Q9Y5I1 949 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 NTRK1P04629 796 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 SNX30Q5VWJ9 437 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 CNSTQ6PJW8 725 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 SETD9Q8NE22 299 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 RXFP1Q9HBX9 757 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 PHPT1Q9NRX4 125 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-201ENST00000219334 PEX1O43933 1283 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 C4BPBP20851 252 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 FLT3P36888 993 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 DNAJC19Q96DA6 116 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 TMPRSS4Q9NRS4 437 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 TAS2R14Q9NYV8 317 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 MRPS33Q9Y291 106 aaKnown RBP19.1■□□□□ 0.65
SMPD3-201ENST00000219334 CCL16O15467 120 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 POLD2P49005 469 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 CRADDP78560 199 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 ZCWPW2Q504Y3 356 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 XKR6Q5GH73 641 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 PARGQ86W56 976 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 SNX32Q86XE0 403 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 CCDC103Q8IW40 242 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 GPR135Q8IZ08 494 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 GLIS3Q8NEA6 775 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 TIFAQ96CG3 184 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 MRPL45Q9BRJ2 306 aaKnown RBP19.1■□□□□ 0.65
SMPD3-201ENST00000219334 SPATA5L1Q9BVQ7 753 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 SERHL2Q9H4I8 314 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 SERHLQ9NQF3 203 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 PIRTP0C851 137 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 KRR1Q13601 381 aaKnown RBP19.1■□□□□ 0.65
SMPD3-201ENST00000219334 ARMCX4Q5H9R4 360 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 ABHD15Q6UXT9 468 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 STK32CQ86UX6 486 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 BTBD9Q96Q07 612 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 CLIC5Q9NZA1 410 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 LYPLA2O95372 231 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 ALADP13716 330 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 ATP5F1P24539 256 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-201ENST00000219334 ITGB3BPQ13352 177 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-201ENST00000219334 DGKKQ5KSL6 1271 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 SH3RF1Q7Z6J0 888 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 GULP1Q9UBP9 304 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 MORF4L1Q9UBU8 362 aa19.1■□□□□ 0.65
SMPD3-201ENST00000219334 KIAA1210Q9ULL0 1709 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 LOC102724159A0A0B4J2E5 919 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 SMIM28A0A1B0GU29 152 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 EPORP19235 508 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 PSMB9P28065 219 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 PWP2Q15269 919 aaKnown RBP19.09■□□□□ 0.65
SMPD3-201ENST00000219334 RNF44Q7L0R7 432 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 RBFAQ8N0V3 343 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 NEK6Q9HC98 313 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 MRPS17Q9Y2R5 130 aaKnown RBP19.09■□□□□ 0.65
SMPD3-201ENST00000219334 LINC00854A0A1B0GVQ3 168 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 AVILO75366 819 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms