RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 C1orf21Q9H246 121 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 WBP11Q9Y2W2 641 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 LAMB2P55268 1798 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FER1L6Q2WGJ9 1857 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 DOT1LQ8TEK3 1739 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 UBE2QL1A1L167 161 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MDM4O15151 490 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CALCAP01258 141 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SRPRAP08240 638 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 ITGA2BP08514 1039 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MGAT1P26572 445 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 DSG3P32926 999 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 GRIA4P48058 902 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 NME5P56597 212 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FAAP100Q0VG06 881 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FUT11Q495W5 492 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 PABPC1LQ4VXU2 614 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 PEG10Q86TG7 708 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 OR2T34Q8NGX1 318 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 OR2T3Q8NH03 318 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 TEKT5Q96M29 485 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 HGH1Q9BTY7 390 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SETD4Q9NVD3 440 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 LIMD1Q9UGP4 676 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 ATF5Q9Y2D1 282 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 PCM1Q15154 2024 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 NRCAMQ92823 1304 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FAM196BA6NMK8 535 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 ZBTB14O43829 449 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 DNAJB5O75953 348 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FARP2O94887 1054 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 CCNDBP1O95273 360 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SEC24AO95486 1093 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FGFR1P11362 822 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 NTSP30990 170 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 GPD2P43304 727 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 LGALS3BPQ08380 585 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CYP2A13Q16696 494 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CDH24Q86UP0 819 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 GLB1L3Q8NCI6 653 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 IRGQQ8WZA9 623 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MRPS31Q92665 395 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 PRCCQ92733 491 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 COX4I2Q96KJ9 171 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 REXO4Q9GZR2 422 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 UBAP1Q9NZ09 502 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 PSME2Q9UL46 239 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 ZNF232Q9UNY5 417 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 STON1Q9Y6Q2 735 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 RREB1Q92766 1687 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 LRP6O75581 1613 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FAM237BA0A1B0GVD1 139 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 C5orf60A6NFR6 353 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FAM86B1E9PN63 330 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 G3V2T6 193 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 BNIP3LO60238 219 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 NBNO60934 754 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 PSMD10O75832 226 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 VAPBO95292 243 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 NPPAP01160 153 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 LTFP02788 710 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FAM86B2P0C5J1 330 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 HSMCR30P0CW71 290 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MZF1P28698 734 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 HOXA10P31260 410 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 TUFMP49411 452 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 NDST1P52848 882 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 QPRTQ15274 297 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 ALG11Q2TAA5 492 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 EPC2Q52LR7 807 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MFSD4BQ5TF39 518 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 LAYNQ6UX15 382 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 TMEM139Q8IV31 216 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MPP5Q8N3R9 675 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 RNF157Q96PX1 679 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CHCHD6Q9BRQ6 235 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 RBM22Q9NW64 420 aaKnown RBP eCLIP4.45□□□□□ -1.74e-7■■■□□ 16.7
CHD9-201ENST00000219084 CCDC59Q9P031 241 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 SEC14L4Q9UDX3 406 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SLC9A8Q9Y2E8 581 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 PCDHB5Q9Y5E4 795 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 PCDHGB3Q9Y5G1 929 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 TCRBV9S1A1TA0A576 114 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SLC9A3R1O14745 358 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 SERPINB7O75635 380 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CBX6O95503 412 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FTH1P02794 183 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 HMBSP08397 361 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SLC2A4P14672 509 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 TPP2P29144 1249 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 GPC1P35052 558 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 MATKP42679 507 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FCGRTP55899 365 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 ALDH6A1Q02252 535 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 TUBA3CQ13748 450 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 NEPROQ6NW34 567 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CXXC5Q7LFL8 322 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 PIGWQ7Z7B1 504 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CLYBLQ8N0X4 340 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CHCHD4Q8N4Q1 142 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms