RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PBX3P40426 434 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CLCN5P51795 746 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 HK2P52789 917 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PRAMEP78395 509 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ARHGAP8P85298 464 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 POU4F1Q01851 419 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 DSC2Q02487 901 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 LAMB3Q13751 1172 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 UBAP2LQ14157 1087 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 LBRQ14739 615 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 HSF5Q4G112 596 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TSTD2Q5T7W7 516 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 RASIP1Q5U651 963 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 NEPROQ6NW34 567 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CIR1Q86X95 450 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TREML1Q86YW5 311 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TDRD5Q8NAT2 981 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TTC8Q8TAM2 541 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 KCTD4Q8WVF5 259 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 STMN2Q93045 179 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 IGSF8Q969P0 613 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 IFT43Q96FT9 208 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TSPAN17Q96FV3 270 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CEP295NLQ96MC4 621 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TACO1Q9BSH4 297 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CCDC106Q9BWC9 280 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CCSER2Q9H7U1 834 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 EBF2Q9HAK2 575 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PNPOQ9NVS9 261 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 OXSMQ9NWU1 459 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TAS2R1Q9NYW7 299 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 XPR1Q9UBH6 696 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 HCSTQ9UBK5 93 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 DNMT3LQ9UJW3 386 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 RUVBL2Q9Y230 463 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 PQBP1O60828 265 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 FKTNO75072 461 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 PEX11AO75192 247 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ANP32DO95626 131 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ATP5C1P36542 298 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ETFBP38117 255 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 GLRBP48167 497 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 SLC11A2P49281 568 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 TUFMP49411 452 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ALDH7A1P49419 539 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ILF2Q12905 390 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 SERINC3Q13530 473 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 FSCBQ5H9T9 825 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 RABGAP1LQ5R372 815 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 KLC3Q6P597 504 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 PRSS55Q6UWB4 352 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 LMNTD2Q8IXW0 634 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 LGI2Q8N0V4 545 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 TEX26Q8N6G2 289 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF781Q8N8C0 355 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ACVR1CQ8NER5 493 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF512Q96ME7 567 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ILKAPQ9H0C8 392 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 CRISPLD1Q9H336 500 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 DENND2DQ9H6A0 471 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ATP13A1Q9HD20 1204 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 UXTQ9UBK9 157 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 C15orf41Q9Y2V0 281 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 TANC1Q9C0D5 1861 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 GREB1Q4ZG55 1949 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 TBC1D4O60343 1298 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 PARNO95453 639 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 FGF1P05230 155 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ZDHHC11BP0C7U3 371 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ATF6P18850 670 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 HLA-DPA1P20036 260 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 GABRB3P28472 473 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 IDH3AP50213 366 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 CSRP3P50461 194 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 COPAP53621 1224 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 TNK2Q07912 1038 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 PRKAA1Q13131 559 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ZRSR2Q15696 482 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 CCDC6Q16204 474 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 USP41Q3LFD5 358 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 KIAA1841Q6NSI8 718 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 RSPO2Q6UXX9 243 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 CENPLQ8N0S6 344 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 FSTL5Q8N475 847 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 RBM15BQ8NDT2 890 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 OR6Y1Q8NGX8 325 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 STYXQ8WUJ0 223 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 SCG3Q8WXD2 468 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 OVCA2Q8WZ82 227 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF599Q96NL3 588 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 TTLL2Q9BWV7 592 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 GATA5Q9BWX5 397 aaPredicted RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 C1QTNF1Q9BXJ1 281 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 MRPL46Q9H2W6 279 aaKnown RBP8.34□□□□□ -1.07
VAMP3-201ENST00000054666 DCLRE1BQ9H816 532 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms