RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Atp2a3Q64518 1038 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 VwdeQ6DFV8 926 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Nrg1Q6DR99 700 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Slc16a9Q7TM99 508 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Frmd4aQ8BIE6 1020 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Slco6c1Q8C0X7 706 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Def6Q8C2K1 630 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Tcf25Q8R3L2 676 aaKnown RBP26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Thoc1Q8R3N6 657 aaKnown RBP26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Glra3Q91XP5 464 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Homer3Q99JP6 356 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Q9CPS8 106 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 NtpcrQ9CQA9 190 aaKnown RBP26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Duoxa2Q9D311 320 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Taf7lQ9D3R9 471 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Sun1Q9D666 913 aaKnown RBP26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Rfc2Q9WUK4 349 aaKnown RBP26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Kat6aQ8BZ21 2003 aa26.07■■□□□ 1.76
Tpm1-216ENSMUST00000113707 PiggD3Z3Y1 983 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Zfp839E9PUU5 921 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 JundP15066 341 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Smpdl3bP58242 456 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Ranbp9P69566 653 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 RhocQ62159 193 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Tecpr1Q80VP0 1166 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Q8C4P0 716 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Wnt9aQ8R5M2 365 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Ubap2Q91VX2 1132 aaKnown RBP26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 KmoQ91WN4 479 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Cttnbp2nlQ99LJ0 638 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Pbx4Q99NE9 378 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Noa1Q9JJG9 693 aaKnown RBP26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Myo1cQ9WTI7 1063 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Zfp612A0A1D5RMC2 672 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Gm12248A0A1W2P8B8 313 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Adamts14E9PX39 1209 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Gm20431E9PY39 371 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Gm8257E9Q8R3 264 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Taf4E9QAP7 1042 aaKnown RBP26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Trove2O08848 538 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Sdc4O35988 198 aaKnown RBP26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 CstaP56567 97 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 NcstnP57716 708 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Mettl17Q3U2U7 461 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Tmem199Q5SYH2 208 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Smad3Q8BUN5 425 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Slc41a2Q8BYR8 573 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Trim61Q8JZK6 461 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Vmn1r213Q8R278 384 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Pcdha6Q91Y14 946 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Tceal1Q921P9 165 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Dhrs7bQ99J47 323 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Prpsap1Q9D0M1 356 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 PolhQ9JJN0 694 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Rp1l1Q8CGM2 1859 aa26.06■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Fbxl18E9PYR1 771 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Cer1O55233 272 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 PargO88622 969 aaKnown RBP26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Glt6d1Q2NKH9 311 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Arhgap45Q3TBD2 1116 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Prmt9Q3U3W5 846 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Trafd1Q3UDK1 580 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 1810049J17RikQ3V2G9 153 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Cntn4Q69Z26 1026 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Scd4Q6T707 353 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Paqr6Q6TCG5 343 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 BfarQ8R079 450 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Trip4Q9QXN3 581 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 PtprdQ64487 1912 aa26.05■■□□□ 1.76
Tpm1-216ENSMUST00000113707 1110002E22RikE0CYV9 1786 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Fzd1O70421 642 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 P01810 119 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Dnmt3cP0DOY1 709 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Atxn7l3bQ3UD01 97 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Foxr1Q3UTB7 268 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Trim80Q3V061 624 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 LpoQ5SW46 710 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Arcn1Q5XJY5 511 aaKnown RBP26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Sort1Q6PHU5 825 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Olfr1062Q7TR71 315 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Olfr698Q7TRN4 311 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Cep104Q80V31 926 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 TdrkhQ80VL1 560 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Mgat5Q8R4G6 740 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Efhc2Q9D485 750 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Actrt2Q9D9L5 377 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 CasrQ9QY96 1079 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Gm21964A0A1W2P7S4 437 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Cd9P40240 226 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Nemp1Q6ZQE4 437 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Olfm2Q8BM13 448 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Rbm34Q8C5L7 375 aaKnown RBP26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Cacnb2Q8CC27 655 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Abcf3Q8K268 709 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Champ1Q8K327 802 aaKnown RBP26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Dok4Q99KE3 325 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Rrp15Q9CYX7 281 aaKnown RBP26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 TsaccQ9DA44 124 aa26.04■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Ralgps1A2AR50 585 aa26.03■■□□□ 1.76
Tpm1-216ENSMUST00000113707 Gm5930D3Z257 264 aa26.03■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms