RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 ChkaO54804 453 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cyp2b19O55071 492 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 C4bpaP08607 469 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rag1P15919 1040 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Uba1yP31254 1058 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pou2f3P31362 431 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pon1P52430 355 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 GemP55041 295 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rtel1Q0VGM9 1203 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Got1l1Q7TSV6 404 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Kxd1Q80XH1 177 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Dennd1cQ8CFK6 786 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pcdhb13Q91Y06 796 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Msi2Q920Q6 346 aaKnown RBP10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tas1r2Q925I4 843 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CinpQ9D0V8 212 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Capns2Q9D7J7 247 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Dio2Q9Z1Y9 266 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Stk25Q9Z2W1 426 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfhx2Q2MHN3 2562 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nlrp1bA1Z198 1177 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 5730507C01RikJ3QPX0 416 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Art2bO35975 289 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cd2P08920 344 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Adh5P28474 374 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ctps1P70698 591 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lig3P97386 1015 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rrp36Q3UFY0 244 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm853Q3UNZ2 425 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Drc1Q3USS3 753 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mfsd3Q5U419 412 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam120bQ6RI63 786 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Stambpl1Q76N33 436 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Trmt10aQ8C1Z8 328 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gramd1aQ8VEF1 722 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ubox5Q925F4 539 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Hars2Q99KK9 505 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mlf2Q99KX1 247 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tmem135Q9CYV5 458 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CtsrQ9JIA9 334 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tacc3Q9JJ11 631 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm13283A0A087WPG5 182 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp952B0V2W4 504 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 F3P20352 294 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gja4P28235 333 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PdgfbP31240 241 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Atp5bP56480 529 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Eif4ebp2P70445 120 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Acsbg2Q2XU92 667 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zbtb16Q3UQ17 673 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nr1d1Q3UV55 615 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Znf583Q3V080 568 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 HecaQ3V1N5 544 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Spata48Q5NC83 441 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zmpste24Q80W54 475 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gramd4Q8CB44 633 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Slc36a1Q8K4D3 475 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 BfarQ8R079 450 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ecrg4Q99LS0 148 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Smad9Q9JIW5 430 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 XkQ9QXY7 446 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cldn3Q9Z0G9 219 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ror1Q9Z139 937 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Il18rapQ9Z2B1 614 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pdk4O70571 412 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ap2a1P17426 977 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 BtkP35991 659 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 MipP51180 263 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sash1P59808 1230 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Col6a2Q02788 1034 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Aars2Q14CH7 980 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Atxn7l3bQ3UD01 97 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 1810049J17RikQ3V2G9 153 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Znrf3Q5SSZ7 913 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CcncQ62447 283 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sema4cQ64151 834 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Heatr6Q6P1G0 1184 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cand1Q6ZQ38 1230 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rfx6Q8C7R7 927 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Znf426Q8R1D1 550 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ndufs1Q91VD9 727 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lpgat1Q91YX5 370 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ackr4Q924I3 350 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ndufa10Q99LC3 355 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Get4Q9D1H7 327 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 1700013H16RikQ9DAC5 291 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Habp4Q9JKS5 411 aaKnown RBP10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PapolbQ9WVP6 641 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Scn8aQ9WTU3 1978 aa10.05□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 A0A286YCD0 109 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vmn1r55E9Q8I6 310 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 MntO08789 591 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 GzmkO35205 263 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CtssO70370 340 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sbk3P0C5K0 361 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pebp1P70296 187 aaKnown RBP10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam131bQ3TY60 332 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nfe2l1Q61985 741 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nuak1Q641K5 658 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Dnajc15Q78YY6 149 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms