RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 KmoQ91WN4 479 aa8.82□□□□□ -1
Trim39-201ENSMUST00000042717 Serpina3nQ91WP6 418 aa8.82□□□□□ -1
Trim39-201ENSMUST00000042717 Wrnip1Q91XU0 660 aa8.82□□□□□ -1
Trim39-201ENSMUST00000042717 IgtpQ9DCE9 423 aa8.82□□□□□ -1
Trim39-201ENSMUST00000042717 Smad9Q9JIW5 430 aa8.82□□□□□ -1
Trim39-201ENSMUST00000042717 Cyb561d2Q9WUE3 222 aa8.82□□□□□ -1
Trim39-201ENSMUST00000042717 KcpQ3U492 1550 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Shroom3Q9QXN0 1986 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Ighv11-1A0A075B5R6 117 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Itpripl1A2ASA8 547 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Tcp10cE9Q046 482 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Nsmce4aG3XA30 381 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 C1qbpO35658 278 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 TyrP11344 533 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Arf5P84084 180 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Csf2raQ00941 388 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Caprin2Q05A80 1031 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Fam131bQ3TY60 332 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Garnl3Q3V0G7 1038 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Creb3Q61817 404 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 CcncQ62447 283 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Inpp4bQ6P1Y8 924 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Casc4Q6P2L7 435 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Rad54bQ6PFE3 886 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Gtf3c4Q8BMQ2 817 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Pggt1bQ8BUY9 377 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Jbts17Q8CE72 3214 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Gspt1Q8R050 636 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr665Q8VG79 316 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 CenpsQ9D084 142 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Efhc2Q9D485 750 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Necab3Q9D6J4 353 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Dusp21Q9D9D8 189 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 GmprQ9DCZ1 345 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Slc29a1Q9JIM1 460 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 RhoaQ9QUI0 193 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Stat2Q9WVL2 923 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Ddx39bQ9Z1N5 428 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Igkv16-104A0A0B4J1I1 116 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Card9A2AIV8 536 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Maml3D4QGC2 1135 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Stx7O70439 261 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 F3P20352 294 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 SmoP56726 793 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Pih1d3Q3KNI6 218 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Lmf1Q3U3R4 574 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Ppp1r7Q3UM45 361 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 ADGRF3Q58Y75 991 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Mtnr1aQ61184 353 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 HiraQ61666 1015 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Dnajc15Q78YY6 149 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Zbtb24Q80X44 710 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp595Q8BIN6 625 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Hectd2Q8CDU6 774 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Dennd1cQ8CFK6 786 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Cwf19l1Q8CI33 537 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Rtn4rl1Q8K0S5 445 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Mta1Q8K4B0 715 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Sh3kbp1Q8R550 709 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Imp4Q8VHZ7 291 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Pcdha6Q91Y14 946 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 HnrnpllQ921F4 591 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Oas1cQ924S2 362 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Serbp1Q9CY58 407 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Rrp15Q9CYX7 281 aaKnown RBP8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Mgat4dQ9D4R2 373 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Cyp3a41aQ9JMA7 504 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Msh5Q9QUM7 833 aa8.81□□□□□ -1
Trim39-201ENSMUST00000042717 Gm14781A2A9Q9 366 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Gm11758A2BEI6 360 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Gm11757A2BEI8 360 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Lilra5D3Z7A9 295 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 MntO08789 591 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Casq2O09161 415 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Syngr1O55100 234 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 CkmP07310 381 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Slc2a7P0C6A1 513 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Ptger3P30557 365 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Adrb1P34971 466 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Cxcl12P40224 93 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Ripk2P58801 539 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Ncf4P97369 339 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 1700061G19RikQ08EE8 705 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Mageb5Q14AN0 366 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Slc24a2Q14BI1 711 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp607aQ3TQG9 686 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 E330034G19RikQ3UWX6 351 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 PtprrQ62132 656 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Krba1Q6NXZ1 1043 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Them6Q80ZW2 207 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Gm6377Q8BHV4 303 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Lrrc19Q8BZT5 364 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Tgif2Q8C0Y1 237 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 PygbQ8CI94 843 aaKnown RBP8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr342Q8VGK7 312 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 PpanQ91YU8 470 aaKnown RBP8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Tcf7l2Q924A0 459 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Sike1Q9CPR7 207 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Duoxa2Q9D311 320 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Efcab9Q9DAM2 216 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms