RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 CrymO54983 313 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Mthfd2P18155 350 aaKnown RBP19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 IppP28575 584 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tlx1P43345 332 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Mxd1P50538 227 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ccr5P51682 354 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tmed1Q3V009 227 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Zbtb8osQ505B7 168 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ecm1Q61508 559 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Letm2Q7TNU7 480 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ccdc32Q8BS39 179 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Itpk1Q8BYN3 419 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Bend5Q8C6D4 421 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Parp9Q8CAS9 866 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Otud7aQ8R554 926 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Traf7Q922B6 594 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ccdc97Q9DBT3 340 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Zbtb12Q9Z150 459 aa19.25■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Gm21083A0A0G2JFD5 256 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Gm43951A0A0N4SUT6 962 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Vmn2r5K7N788 911 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Vmn2r1O70410 912 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 BrafP28028 804 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Pld2P97813 933 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Pik3r6Q3U6Q4 756 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Gba2Q69ZF3 918 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Grik4Q8BMF5 956 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Rmdn2Q8BSE0 410 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Smim11aQ99J19 55 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Dhrs1Q99L04 313 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Slc29a1Q9JIM1 460 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Rnf11Q9QYK7 154 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Sept6Q9R1T4 434 aa19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 VarsQ9Z1Q9 1263 aaKnown RBP19.24■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Gm42688A0A0R3P9D1 673 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Fam166bA2AIP0 273 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 A930018M24RikB7ZMY3 218 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 P01740 135 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Atp5jP97450 108 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Adra1dP97714 562 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 TchpQ3TVW5 497 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ndst1Q3UHN9 882 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ntan1Q64311 310 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Trit1Q80UN9 467 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Samd4bQ80XS6 687 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 EmsyQ8BMB0 1264 aaKnown RBP19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Lig4Q8BTF7 911 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ccdc90bQ8C3X2 256 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ccdc142Q8CAI1 738 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Snx8Q8CFD4 459 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Celf3Q8CIN6 465 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Vopp1Q8R1C3 172 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Nol6Q8R5K4 1152 aaKnown RBP19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Pcdhb2Q91Y00 799 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Rmnd5bQ91YQ7 393 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 DdoQ922Z0 341 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tnip2Q99JG7 430 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Cdyl2Q9D5D8 503 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Hormad1Q9D5T7 392 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tsga13Q9DA17 273 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Syvn1Q9DBY1 612 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Slamf1Q9QUM4 343 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Syt5Q9R0N5 386 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ttll8A4Q9F1 832 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 P01641 117 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Krt1P04104 637 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 LtfP08071 707 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ncf4P97369 339 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 AnpepP97449 966 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Prmt6Q6NZB1 378 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Arl5cQ6P068 179 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Fam83eQ80XS7 481 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 R3hcc1lQ8BJM3 775 aaKnown RBP19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Nsl1Q8K305 281 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Gfm2Q8R2Q4 779 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Serpina3nQ91WP6 418 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tcf7l2Q924A0 459 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 PigxQ99LV7 254 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Nrf1Q9WU00 503 aa19.23■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 2010300C02RikE9Q3M9 1175 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Pcsk6F6XJP7 959 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Il4i1O09046 630 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ptpn20O55082 426 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Mup5P11591 180 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Gabrb3P63080 473 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tuba1cP68373 449 aaKnown RBP19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Hbq1bQ3U0A6 142 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Olfm4Q3UZZ4 505 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 PhgdhQ61753 533 aaKnown RBP19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Arhgap30Q640N3 1101 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ip6k1Q6PD10 433 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Olfr698Q7TRN4 311 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Kctd13Q8BGV7 329 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Nipal1Q8BMW7 416 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Rab36Q8CAM5 267 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Snrpb2Q9CQI7 225 aaKnown RBP19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Ttc25Q9D4B2 624 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Il17rbQ9JIP3 499 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Cacng3Q9JJV5 315 aa19.22■□□□□ 0.67
Ccdc50-201ENSMUST00000039443 Tuba8Q9JJZ2 449 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms