RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tmem233D3Z1U7 110 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm6351K9J7D1 481 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 KlO35082 1014 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 P01740 135 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sbk3P0C5K0 361 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rab10P61027 200 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ybx1P62960 322 aaKnown RBP13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 PrkacbP68181 351 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 YwhaqP68254 245 aaKnown RBP13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ctps2P70303 586 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 BmxP97504 651 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ceacam5Q3UKK2 947 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mfsd3Q5U419 412 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 MogQ61885 246 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rslcan18Q7M6X5 460 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ints7Q7TQK1 966 aaKnown RBP13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Trit1Q80UN9 467 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tmem260Q8BMD6 703 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pyhin1Q8BV49 420 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mrpl47Q8K2Y7 252 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Vmn1r199Q8R280 367 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pcdhac2Q91Y09 1006 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 PclafQ9CQX4 110 aaKnown RBP13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 CenpsQ9D084 142 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Hmgn3Q9DCB1 99 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Wnt8bQ9WUD6 350 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyb561d2Q9WUE3 222 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Msl3Q9WVG9 525 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zfp236S4R299 1847 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 SisF8VQM5 1818 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm281D3Z1Y0 860 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Vmn2r11E9Q4X4 861 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 BC024978J3QPC3 361 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sema3aO08665 772 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kcnk4O88454 398 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 P01670 111 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 P01671 111 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 P01672 111 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Krt4P07744 525 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Psmd3P14685 530 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ccr5P51682 354 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 CtswP56203 371 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 St14P56677 855 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Adcyap1r1P70205 496 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Arl14Q3SXC5 192 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Olfm4Q3UZZ4 505 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Il15raQ60819 263 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ddx55Q6ZPL9 600 aaKnown RBP13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zdhhc19Q810M5 347 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Bmp3Q8BHE5 468 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 4933402J07RikQ8BHX0 270 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tmprss4Q8VCA5 435 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 OptcQ920A0 328 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Reep3Q99KK1 254 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 St7Q99M96 577 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 MydgfQ9CPT4 166 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ptk2bQ9QVP9 1009 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Morf4l2Q9R0Q4 288 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Racgap1Q9WVM1 628 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Btbd35f16A0A087WSN2 498 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm6370A0A0G2JGX9 315 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 FgaE9PV24 789 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Adamts14E9PX39 1209 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm6309L7N481 315 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Atn1O35126 1175 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 NmbrO54799 390 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ppp3cbP48453 525 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rps12P63323 132 aaKnown RBP13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Adamts1P97857 968 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mtf2Q02395 593 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Nat9Q3UG98 241 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lrrc8bQ5DU41 803 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Arhgap1Q5FWK3 439 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tfap2cQ61312 449 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rfx4Q7TNK1 735 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Actr5Q80US4 605 aaKnown RBP13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rnf168Q80XJ2 565 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Elmo2Q8BHL5 732 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 EmsyQ8BMB0 1264 aaKnown RBP13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tmem154Q8C4Q9 181 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ppp4r1Q8K2V1 951 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gfm2Q8R2Q4 779 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Smim14Q91VT8 99 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 B4galt3Q91YY2 395 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mccc1Q99MR8 717 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rgs10Q9CQE5 181 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Polr3eQ9CZT4 710 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Clvs1Q9D4C9 354 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cacng4Q9JJV4 327 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 AadatQ9WVM8 425 aa13.56□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm13941A2AJ38 245 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kdelc2G5E897 503 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mup13L7N222 235 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 PdgfrbP05622 1098 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 SagP20443 403 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cd72P21855 354 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 IppP28575 584 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Wdr36Q3TAQ9 899 aaKnown RBP13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Fam189a2Q4FZH1 290 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Xpo1Q6P5F9 1071 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms