RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Mmp3P28862 477 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Naa20P61600 178 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Lpcat1Q3TFD2 534 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 KdsrQ6GV12 332 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gja6Q6S5G4 283 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 LppQ8BFW7 613 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Sh3rf3Q8C120 878 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Snapc1Q8K0S9 389 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Colec12Q8K4Q8 742 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Scd3Q99PL7 359 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Batf3Q9D275 118 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ddx59Q9DBN9 619 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 HnrnpdlQ9Z130 301 aaKnown RBP16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Klhdc7aA2APT9 773 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Zbtb11G5E8B9 1050 aaKnown RBP16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 LdhcP00342 332 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mtf2Q02395 593 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Arl14Q3SXC5 192 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gdpd4Q3TT99 632 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Hat1Q8BY71 416 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Lca5lQ8C0X0 741 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 DolkQ8R2Y3 534 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fam192aQ91WE2 254 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Trappc5Q9CQA1 188 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Snrnp48Q9D361 337 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Atg7Q9D906 698 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Slc25a19Q9DAM5 318 aa16.75■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Usp39Q3TIX9 564 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Olfml2bQ3V1G4 746 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 B3glctQ8BHT6 489 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fbxw8Q8BIA4 598 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ptpn7Q8BUM3 359 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mtg1Q8R2R6 326 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pacsin3Q99JB8 424 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Grip2G3XA20 1042 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Cd70O55237 195 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Per3O70361 1113 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Resp18P47939 175 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Snrpd1P62315 119 aaKnown RBP16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pih1d3Q3KNI6 218 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Cyp2j13Q3UNV4 503 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 DazlQ64368 298 aaKnown RBP16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 GnasQ6R0H7 1133 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Reep1Q8BGH4 201 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gsdmc3Q8CB12 480 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 TbccQ8VCN9 341 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gtf2ird2Q99NI3 936 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ssxb8B1AY40 170 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Tnfrsf18O35714 228 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ifrd1P19182 449 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Slc20a1Q61609 681 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Zswim5Q80TC6 1188 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 March4Q80TE3 409 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Plac9Q8K262 108 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Chrna3Q8R4G9 499 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pcdhga4Q91XY4 930 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Tmco1Q921L3 188 aaKnown RBP16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 CabyrQ9D424 453 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mpp6Q9JLB0 553 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Cdc42ep5Q9Z0X0 150 aa16.74■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mrgpra2aA0A0R4J1Z0 331 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rad21l1A2AU37 552 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Acvr2bP27040 536 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Papss1Q60967 624 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Awat2Q6E1M8 333 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ubxn7Q6P5G6 467 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Q6PAC4 1279 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Klhl5Q6PFE1 708 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mcph1Q7TT79 822 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mettl21cQ8BLU2 248 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mfsd14bQ8CIA9 507 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mrto4Q9D0I8 239 aaKnown RBP16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fam46dB1ATX6 390 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 D3Z070 196 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gm8369E9PZI3 166 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Dnal1Q05A62 190 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gpsm3Q3U1Z5 159 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 CenplQ3U3S3 329 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Slc9b2Q5BKR2 547 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Cldn11Q60771 207 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Defa17Q64016 82 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Oscp1Q8BHW2 379 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Sfrp1Q8C4U3 314 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 N4bp2l2Q8JZS6 575 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pcdhb13Q91Y06 796 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Tmed5Q9CXE7 229 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gm27029A2A4P4 543 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 1600015I10RikE9Q745 711 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Zc3h12bG3X9I7 835 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pde8aO88502 823 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 AcadmP45952 421 aaKnown RBP16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Brms1lQ3U1T3 323 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Nxpe4Q52KP5 543 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ecm1Q61508 559 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Q8BL95 290 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Chst12Q99LL3 419 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Khdc3Q9CWU5 440 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Anks3Q9CZK6 655 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Wdr12Q9JJA4 423 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Znhit2Q9QY66 399 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms