RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ccr1P51675 355 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 StimateQ3UF25 288 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Arhgap20Q6IFT4 1182 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mtmr12Q80TA6 747 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 IrgcQ8C262 412 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ifi205aQ8CGE8 404 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tmem86aQ9D8N3 241 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Znf207Q9JMD0 495 aaKnown RBP10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Abhd12bG3UZN6 359 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tuba3aP05214 450 aaKnown RBP10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rin3P59729 980 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Usp39Q3TIX9 564 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Adam39Q7M762 756 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Epn2Q8CHU3 595 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lsm7Q9CQQ8 103 aaKnown RBP10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q9D1Z2 194 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mbd3l1Q9D9H3 186 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 March8Q9DBD2 286 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Akr1c12Q9JLI0 323 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Smok1Q9QYZ4 484 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Akap8lQ9R0L7 642 aaKnown RBP10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nat1P50294 290 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fam91a1Q3UVG3 837 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Eif2b4Q61749 524 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Txndc8Q69AB2 127 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mis18bp1Q80WQ8 998 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rftn2Q8CHX7 500 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zdhhc12Q8VC90 267 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pcdhgb2Q91XX7 928 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vta1Q9CR26 309 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Taf1dQ9D4V4 322 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Myo5cE9Q1F5 1742 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zfp275G3X904 499 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ncam1P13595 1115 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mfsd14aP70187 490 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ppp6r2Q8R3Q2 923 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Znf24Q91VN1 368 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 B3galt6Q91Z92 325 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Trps1Q925H1 1281 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zbed3Q9D0L1 228 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cldn22Q9D7U6 220 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dip2cE9PWR4 1557 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Umodl1Q5DID3 1319 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm6205E9PZS2 359 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Igfbp6P47880 238 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rps7P62082 194 aaKnown RBP10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 NfixP70257 488 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm6367Q8C6L9 287 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pih1d2Q8CHR9 315 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Coq9Q8K1Z0 313 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 TpbpbQ9CQC0 121 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Htra1Q9R118 480 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc9a3G3X939 829 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 MbP04247 154 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Teddm2Q208S0 260 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 LvrnQ2KHK3 559 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Orm1Q60590 207 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Colgalt2Q6NVG7 625 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 AW551984Q8BGF0 804 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kansl2Q8BQR4 486 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zfp120Q8BZW4 436 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rft1Q8C3B8 541 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mark4Q8CIP4 752 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fmo2Q8K2I3 535 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ubqln1Q8R317 582 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Decr1Q9CQ62 335 aaKnown RBP10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kctd4Q9D7X1 259 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Spata31d1aE9QA35 1336 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Xlr5bA2BI50 236 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tnfrsf18O35714 228 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lhx5P61375 402 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lpar1P61793 364 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ica1P97411 478 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rgs16P97428 201 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ugt3a1Q3UP75 523 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Thrap3Q569Z6 951 aaKnown RBP10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rad54bQ6PFE3 886 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr449Q8VGW8 311 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rfc5Q9D0F6 339 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Il22Q9JJY9 179 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Egfl7Q9QXT5 275 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r100E9QAZ9 850 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Grip2G3XA20 1042 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Grpel2O88396 224 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 ApoeP08226 311 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rpl7aP12970 266 aaKnown RBP10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Hoxa2P31245 372 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tgfbrap1Q3UR70 860 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gata6Q61169 589 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rtl3Q6P1Y1 553 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ero1bQ8R2E9 467 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ppil6Q9D6D8 278 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mbd2Q9Z2E1 414 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 TprnA2AI08 749 aaKnown RBP10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r72D3Z4N8 856 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Glyatl3E9Q5L8 290 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rhox6O70238 227 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mpp1P70290 466 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Meaf6Q2VPQ9 191 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nemp1Q6ZQE4 437 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms