RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 RASA4BC9J798 803 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 KRIT1O00522 736 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 RASA4O43374 803 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 AP1G1O43747 822 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 POP4O95707 220 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 ATXN1LP0C7T5 689 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 PRLRP16471 622 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 EPHA8P29322 1005 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 RXRGP48443 463 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 RPS21P63220 83 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 RAD51Q06609 339 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 INO80DQ53TQ3 878 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 TDRD12Q587J7 1177 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 ERMARDQ5T6L9 678 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 KIAA1161Q6NSJ0 714 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 PARS2Q7L3T8 475 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 ZSCAN30Q86W11 494 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 SPATS2Q86XZ4 545 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 DNAAF5Q86Y56 855 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 UMODL1-AS1Q8N2C9 162 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 TMEM145Q8NBT3 493 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 RAB7BQ96AH8 199 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 IQCDQ96DY2 449 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 HMCESQ96FZ2 354 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 FEM1CQ96JP0 617 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 GDAP1L1Q96MZ0 367 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 DHX35Q9H5Z1 703 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 MRPL47Q9HD33 250 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 TOR4AQ9NXH8 423 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 ZFR2Q9UPR6 939 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 FADS3Q9Y5Q0 445 aa25.62■■□□□ 1.69
VEGFA-232ENST00000640653 BZW2Q9Y6E2 419 aaKnown RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 TP53BP1Q12888 1972 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-232ENST00000640653 GOLGA8CPA6NN73 597 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 TMCC1O94876 653 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 SERINC3Q13530 473 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 MYLK3Q32MK0 819 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 TMEM259Q4ZIN3 620 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 ZNF805Q5CZA5 627 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 SEL1L3Q68CR1 1132 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 MYOCQ99972 504 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 NCAPGQ9BPX3 1015 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 GPATCH2LQ9NWQ4 482 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 PCSK1NQ9UHG2 260 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 CA5BQ9Y2D0 317 aa25.61■■□□□ 1.69
VEGFA-232ENST00000640653 C16orf96A6NNT2 1141 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 EEF2KO00418 725 aaKnown RBP25.6■■□□□ 1.69
VEGFA-232ENST00000640653 PRPSAP2O60256 369 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 IGSF6O95976 241 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 THEGLP0DJG4 465 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 GKP32189 559 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 PBX1P40424 430 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 ATXN7L2Q5T6C5 722 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-232ENST00000640653 VPS36Q86VN1 386 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 KDF1Q8NAX2 398 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-232ENST00000640653 FAM174AQ8TBP5 190 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 SYN2Q92777 582 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-232ENST00000640653 SNRNP25Q9BV90 132 aaKnown RBP25.6■■□□□ 1.69
VEGFA-232ENST00000640653 KLC2Q9H0B6 622 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 ISCUQ9H1K1 167 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 FZD3Q9NPG1 666 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 MYO1AQ9UBC5 1043 aa25.6■■□□□ 1.69
VEGFA-232ENST00000640653 DAPK3O43293 454 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 DKK1O94907 266 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 UGT2B4P06133 528 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 RHOAP61586 193 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 MAPK8IP2Q13387 824 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-232ENST00000640653 PSTKQ8IV42 348 aaKnown RBP25.59■■□□□ 1.69
VEGFA-232ENST00000640653 ARFGAP1Q8N6T3 406 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 ARHGEF26Q96DR7 871 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.59■■□□□ 1.69
VEGFA-232ENST00000640653 SLC17A9Q9BYT1 436 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 TRIM7Q9C029 511 aa25.59■■□□□ 1.69
VEGFA-232ENST00000640653 NEMP1O14524 444 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 TSPAN6O43657 245 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 MIPP30301 263 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 ZNF135P52742 658 aaPredicted RBP25.58■■□□□ 1.69
VEGFA-232ENST00000640653 NDST2P52849 883 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 ZBED6P86452 979 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 CA9Q16790 459 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 HGSNATQ68CP4 663 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 GDPD4Q6W3E5 623 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 KLHL32Q96NJ5 620 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 PEBP4Q96S96 227 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 LRRC19Q9H756 370 aa25.58■■□□□ 1.69
VEGFA-232ENST00000640653 UBA2Q9UBT2 640 aaPredicted RBP25.58■■□□□ 1.69
VEGFA-232ENST00000640653 LDOC1O95751 146 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-232ENST00000640653 SERPING1P05155 500 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 BNIP3Q12983 259 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 ZSCAN23Q3MJ62 389 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 RFX8Q6ZV50 586 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 ABI3BPQ7Z7G0 1075 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 EID2Q8N6I1 236 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 CNDP2Q96KP4 475 aaKnown RBP25.57■■□□□ 1.68
VEGFA-232ENST00000640653 KCTD15Q96SI1 283 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-232ENST00000640653 CALN1Q9BXU9 219 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 CAPN11Q9UMQ6 739 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 MFHAS1Q9Y4C4 1052 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 HS3ST3A1Q9Y663 406 aa25.57■■□□□ 1.68
VEGFA-232ENST00000640653 CHD8Q9HCK8 2581 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms