RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 RNF38Q9H0F5 515 aa12.4□□□□□ -0.42
PAX6-261ENST00000639943 RXFP1Q9HBX9 757 aa12.4□□□□□ -0.42
PAX6-261ENST00000639943 ATP13A1Q9HD20 1204 aa12.4□□□□□ -0.42
PAX6-261ENST00000639943 GKN1Q9NS71 199 aa12.4□□□□□ -0.42
PAX6-261ENST00000639943 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
PAX6-261ENST00000639943 TEX28O15482 410 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 LILRB3O75022 631 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 FSBPO95073 299 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 IL1BP01584 269 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 KLKB1P03952 638 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 MMP2P08253 660 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ZNF235Q14590 738 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 PABPC1LQ4VXU2 614 aaKnown RBP12.39□□□□□ -0.43
PAX6-261ENST00000639943 ADGRF1Q5T601 910 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 CHST9Q7L1S5 443 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 KDELC2Q7Z4H8 507 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 BBS5Q8N3I7 341 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 RAB3IL1Q8TBN0 382 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 PTPRN2Q92932 1015 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ZNF778Q96MU6 729 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 RANBP9Q96S59 729 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
PAX6-261ENST00000639943 USH1CQ9Y6N9 552 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 PLXNA4Q9HCM2 1894 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 HEATR9A2RTY3 570 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 C2orf78A6NCI8 922 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 FGF18O76093 207 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 MPOP05164 745 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 GSTA1P08263 222 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ETFBP38117 255 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 MAGEA12P43365 314 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 LIG3P49916 1009 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
PAX6-261ENST00000639943 ACTN3Q08043 901 aaPredicted RBP12.39□□□□□ -0.43
PAX6-261ENST00000639943 UGP2Q16851 508 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 FSTL4Q6MZW2 842 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 NUDCD3Q8IVD9 361 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 CNTN4Q8IWV2 1026 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 PGBD5Q8N414 524 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 SLC25A41Q8N5S1 370 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ARRDC2Q8TBH0 407 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ZBP1Q9H171 429 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ATXN3LQ9H3M9 355 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 PDFQ9HBH1 243 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 SNX15Q9NRS6 342 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 SIRPGQ9P1W8 387 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
PAX6-261ENST00000639943 ASB3Q9Y575 518 aa12.39□□□□□ -0.43
PAX6-261ENST00000639943 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 A0A1B0GVM2 712 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 ILVBLA1L0T0 632 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 TCAF2A6NFQ2 919 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 H3BNC9 293 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 LATS1O95835 1130 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 CTSAP10619 480 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 IRF1P10914 325 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 MBL2P11226 248 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 CHRNA4P43681 627 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 RPS24P62847 133 aaKnown RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 SETD3Q86TU7 594 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 FIBCD1Q8N539 461 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 MCMBPQ9BTE3 642 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 A0A0D9SEW6 157 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 CCDC78A2IDD5 438 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 KDELR3O43731 214 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 VAPBO95292 243 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 TGDSO95455 350 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 F11P03951 625 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 BPGMP07738 259 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 ARCN1P48444 511 aaKnown RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 SEPT6Q14141 434 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 N4BP2L1Q5TBK1 243 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 KIAA0930Q6ICG6 404 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 TMEM150AQ86TG1 271 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 C10orf67Q8IYJ2 551 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 GABPB2Q8TAK5 448 aaPredicted RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 PPM1EQ8WY54 764 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 TRIM55Q9BYV6 548 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 RHOJQ9H4E5 214 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 SEPT3Q9UH03 358 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 MTO1Q9Y2Z2 717 aaKnown RBP12.38□□□□□ -0.43
PAX6-261ENST00000639943 OBSL1O75147 1896 aa12.38□□□□□ -0.43
PAX6-261ENST00000639943 LOC285095A0A1B0GVY8 99 aa12.37□□□□□ -0.43
PAX6-261ENST00000639943 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
PAX6-261ENST00000639943 SIN3BO75182 1162 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms