RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 GKAP1Q5VSY0 366 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-220ENST00000639841 DENND1BQ6P3S1 775 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 TMEM154Q6P9G4 183 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 TMEM270Q6UE05 265 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 PLXDC1Q8IUK5 500 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 FAM216AQ8WUB2 273 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 ZNF480Q8WV37 535 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 INTS12Q96CB8 462 aaKnown RBP7.58□□□□□ -1.2
NECAP1-220ENST00000639841 PUS3Q9BZE2 481 aaKnown RBP7.58□□□□□ -1.2
NECAP1-220ENST00000639841 BARX1Q9HBU1 254 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-220ENST00000639841 FBXO34Q9NWN3 711 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 AATFQ9NY61 560 aaKnown RBP eCLIP7.58□□□□□ -1.2
NECAP1-220ENST00000639841 GABRQQ9UN88 632 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 SESN1Q9Y6P5 492 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 ALPK3Q96L96 1907 aa7.58□□□□□ -1.2
NECAP1-220ENST00000639841 CCDC187A0A096LP49 1063 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 TRBC2A0A5B9 178 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CDC14CA4D256 554 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 MYO1CO00159 1063 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ONECUT2O95948 504 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 GNAI3P08754 354 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CYP2C8P10632 490 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 AGAP20933 346 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 PRKCIP41743 596 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ATP5OP48047 213 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ATXN3P54252 364 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CASP9P55211 416 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 IRX3P78415 501 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CEBPZQ03701 1054 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 KRT17Q04695 432 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 SCN1BQ07699 218 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 KCNMA1Q12791 1236 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 FHL3Q13643 280 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 PDK1Q15118 436 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CRB2Q5IJ48 1285 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 SPDYAQ5MJ70 313 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 C12orf60Q5U649 245 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 SLC25A24Q6NUK1 477 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 MAST2Q6P0Q8 1798 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CLEC17AQ6ZS10 378 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 TMEM200AQ86VY9 491 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 PROSER1Q86XN7 944 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 VPS52Q8N1B4 723 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 FBXW8Q8N3Y1 598 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 PIK3C3Q8NEB9 887 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 MIEF2Q96C03 454 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 TMCO6Q96DC7 493 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 SAAL1Q96ER3 474 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 FAM227BQ96M60 508 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ISCUQ9H1K1 167 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 MAGEE1Q9HCI5 957 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 MTMR10Q9NXD2 777 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CNIH4Q9P003 139 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 DNMT3BQ9UBC3 853 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 FAM153AQ9UHL3 310 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 SQORQ9Y6N5 450 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ATAD5Q96QE3 1844 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 MROH7-TTC4A0A0A0MT08 1334 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CCDC169A6NNP5 214 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 GCOM1H8Y6P7 765 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 HNRNPCL1O60812 293 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 KIAA0754O94854 1291 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 AVPP01185 164 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 LMNAP02545 664 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ABCB1P08183 1280 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ASNSP08243 561 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 XRCC6P12956 609 aaKnown RBP eCLIP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ELNP15502 786 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 APEX1P27695 318 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 HOXA7P31268 230 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 TCP10Q12799 353 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ALCAMQ13740 583 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ZNF750Q32MQ0 723 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 BOLA3Q53S33 107 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 C19orf54Q5BKX5 351 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 CD276Q5ZPR3 534 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 RBPMS2Q6ZRY4 209 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 RUFY3Q7L099 469 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 FSIP1Q8NA03 581 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 HASPINQ8TF76 798 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 C11orf54Q9H0W9 315 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 LIN7CQ9NUP9 197 aaKnown RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 LMCD1Q9NZU5 365 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 SLC45A2Q9UMX9 530 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 BTBD3Q9Y2F9 522 aa7.57□□□□□ -1.2
NECAP1-220ENST00000639841 RPH3AQ9Y2J0 694 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-220ENST00000639841 ADAMDEC1O15204 470 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 SEPT4O43236 478 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 ACP5P13686 325 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 TACR1P25103 407 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
NECAP1-220ENST00000639841 SLC6A4P31645 630 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 ARCN1P48444 511 aaKnown RBP7.56□□□□□ -1.2
NECAP1-220ENST00000639841 EPHB3P54753 998 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 OLR1P78380 273 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 MYLK3Q32MK0 819 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 PLA1AQ53H76 456 aa7.56□□□□□ -1.2
NECAP1-220ENST00000639841 ANKRD34AQ69YU3 496 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms