RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 FAM122BQ7Z309 247 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ALLCQ8N6M5 410 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 C1orf52Q8N6N3 182 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 C12orf29Q8N999 325 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC13A3Q8WWT9 602 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 YIPF5Q969M3 257 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 EMID1Q96A84 441 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ALG2Q9H553 416 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DDX4Q9NQI0 724 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GRHPRQ9UBQ7 328 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PPP2R2CQ9Y2T4 447 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CLUHO75153 1309 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 FAM83GA6ND36 823 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TNFAIP8O95379 198 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 HMGCRP04035 888 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PDGFAP04085 211 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CLEC3BP05452 202 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RPIAP49247 311 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DLGAP5Q15398 846 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 MCMDC2Q4G0Z9 681 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC9B1Q4ZJI4 515 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 HP1BP3Q5SSJ5 553 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PET117Q6UWS5 81 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 NIPA1Q7RTP0 329 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PIWIL3Q7Z3Z3 882 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GPR65Q8IYL9 337 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SPAG16Q8N0X2 631 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 LRRC17Q8N6Y2 441 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF248Q8NDW4 579 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CSPG4P5Q96PW8 444 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC25A23Q9BV35 468 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 C1QTNF7Q9BXJ2 289 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TINAGL1Q9GZM7 467 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SARDHQ9UL12 918 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC39A10Q9ULF5 831 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 BAIAP2Q9UQB8 552 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CARMIL2Q6F5E8 1435 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GTPBP1O00178 669 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SOAT2O75908 522 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CDK14O94921 469 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 NSA2O95478 260 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 STX2P32856 288 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GRIA4P48058 902 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC12A3P55017 1021 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TAS2R40P59535 323 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RBP5P82980 135 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 THOC5Q13769 683 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ZFP1Q6P2D0 407 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 LINC00523Q86TU6 105 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TTC16Q8NEE8 873 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TMEM143Q96AN5 459 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 MAN1B1Q9UKM7 699 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 USP18Q9UMW8 372 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GPR45Q9Y5Y3 372 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CSNK1G3Q9Y6M4 447 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 E9PI62 339 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CCNT2O60583 730 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ATP1A3P13637 1013 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 EIF2S3P41091 472 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CRKLP46109 303 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 BTKQ06187 659 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TFCP2Q12800 502 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TARDBPQ13148 414 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TOB2Q14106 344 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 FAM69AQ5T7M9 428 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GPR158Q5T848 1215 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DPY19L2P1Q6NXN4 242 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ADGRF2Q8IZF7 708 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CD300LFQ8TDQ1 290 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 BTBD6Q96KE9 485 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 MTG1Q9BT17 334 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 LHX5Q9H2C1 402 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC12A5Q9H2X9 1139 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RNF41Q9H4P4 317 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ZFYVE28Q9HCC9 887 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ADD3Q9UEY8 706 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TNFSF13BQ9Y275 285 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ATG2BQ96BY7 2078 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ADGRA3Q8IWK6 1321 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 MRC2Q9UBG0 1479 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TMEM191CA6NGB0 347 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 NPIPA2E9PIF3 369 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 H7C2Y5 167 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 KIAA0391O15091 583 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 AKR7A2O43488 359 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PTP4A3O75365 173 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC22A3O75751 556 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TMEM191BP0C7N4 346 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ADSSP30520 456 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CDH5P33151 784 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CPA2P48052 419 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RIDAP52758 137 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 LIPEQ05469 1076 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 KCNC3Q14003 757 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 FIGNQ5HY92 759 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 AACSQ86V21 672 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 IQCHQ86VS3 1027 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 FANCBQ8NB91 859 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ZMYND12Q9H0C1 365 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ITGA11Q9UKX5 1188 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms