RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	ITGB7	P26010	798 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	RECQL	P46063	649 aa	Predicted RBP	11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	ARSD	P51689	593 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	CDC20	Q12834	499 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	NNT	Q13423	1086 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	SEPT6	Q14141	434 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	RABGAP1L	Q5R372	815 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	RD3	Q7Z3Z2	195 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	VPS36	Q86VN1	386 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	HID1	Q8IV36	788 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	SLITRK4	Q8IW52	837 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	FSTL5	Q8N475	847 aa	Predicted RBP	11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	OR6C4	Q8NGE1	309 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	FAM149B1	Q96BN6	582 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	TMX3	Q96JJ7	454 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	BTN2A3P	Q96KV6	586 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	TAAR9	Q96RI9	348 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	B3GNT4	Q9C0J1	378 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	CDH19	Q9H159	772 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	MUC3B	Q9H195	1237 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	CUEDC2	Q9H467	287 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	RDH14	Q9HBH5	336 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	CASS4	Q9NQ75	786 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	PRDM8	Q9NQV8	689 aa		11.94	□□□□□ -0.5
PAX6-238	ENST00000638755	NEMP1	O14524	444 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	SMAD6	O43541	496 aa	Known RBP	11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	SNAP91	O60641	907 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	EIF4A3	P38919	411 aa	Known RBP	11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	IRAK1	P51617	712 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	MAP9	Q49MG5	647 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	EFHC2	Q5JST6	749 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	C1QL3	Q5VWW1	255 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	SYPL2	Q5VXT5	272 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	LVRN	Q6Q4G3	990 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	SPRED1	Q7Z699	444 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	GKN2	Q86XP6	184 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	RCBTB1	Q8NDN9	531 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	TSACC	Q96A04	125 aa	Predicted RBP	11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	EEF2KMT	Q96G04	330 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	SLC45A3	Q96JT2	553 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	RPRD1A	Q96P16	312 aa	Predicted RBP	11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	HS3ST2	Q9Y278	367 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	ITM2B	Q9Y287	266 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	OR51B4	Q9Y5P0	310 aa		11.93	□□□□□ -0.5
PAX6-238	ENST00000638755	KCNU1	A8MYU2	1149 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755		O00370	1275 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	CAPN5	O15484	640 aa	Predicted RBP	11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	RAD1	O60671	282 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	EIF5B	O60841	1220 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	DDAH2	O95865	285 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	FGF3	P11487	239 aa	Predicted RBP	11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	KRT13	P13646	458 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	PDIA4	P13667	645 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	PDC	P20941	246 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	OAS2	P29728	719 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	L1CAM	P32004	1257 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	IGFALS	P35858	605 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	BLK	P51451	505 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	HK3	P52790	923 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	KRT83	P78385	493 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	ARHGEF7	Q14155	803 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	SLC39A14	Q15043	492 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	ARHGAP44	Q17R89	818 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	AMZ1	Q400G9	498 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	ATP1A1-AS1	Q5TC04	95 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	FBXL22	Q6P050	247 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	C16orf46	Q6P387	395 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	LINGO4	Q6UY18	593 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	MACC1	Q6ZN28	852 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	DPY19L3	Q6ZPD9	716 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	ASB18	Q6ZVZ8	466 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	UNC5B	Q8IZJ1	945 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	ATP6V0D2	Q8N8Y2	350 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	IQUB	Q8NA54	791 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	DENND6B	Q8NEG7	585 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	CPT1C	Q8TCG5	803 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	SLC35F5	Q8WV83	523 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	CENPT	Q96BT3	561 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	PRMT1	Q99873	361 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	EDEM3	Q9BZQ6	932 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	KCTD10	Q9H3F6	313 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	TMEM8A	Q9HCN3	771 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	PPP4R2	Q9NY27	417 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	LRIT1	Q9P2V4	623 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	APPL1	Q9UKG1	709 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	B3GALT1	Q9Y5Z6	326 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	WASF2	Q9Y6W5	498 aa		11.92	□□□□□ -0.5
PAX6-238	ENST00000638755	ZFHX3	Q15911	3703 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	PVALEF	A0A1B0GWK0	134 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755		M0QYV0	167 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	PDXK	O00764	312 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	TSPAN6	O43657	245 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	AP1G1	O43747	822 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	FBXO21	O94952	628 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	VDR	P11473	427 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	GLB1	P16278	677 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	GRN	P28799	593 aa	Known RBP	11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	DNA2	P51530	1060 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms