RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 FTLP02792 175 aaPredicted RBP19.27■□□□□ 0.68
CLN6-221ENST00000637494 THEGLP0DJG4 465 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 CDK4P11802 303 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 PRKCIP41743 596 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 RHOAP61586 193 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 SGCGQ13326 291 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 IQCB1Q15051 598 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 MYLK3Q32MK0 819 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 ZNF805Q5CZA5 627 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 PLEKHA7Q6IQ23 1121 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 LEKR1Q6ZMV7 388 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 PARS2Q7L3T8 475 aaKnown RBP19.27■□□□□ 0.68
CLN6-221ENST00000637494 VPS36Q86VN1 386 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 EID2Q8N6I1 236 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 NAP1L5Q96NT1 182 aaPredicted RBP19.27■□□□□ 0.68
CLN6-221ENST00000637494 SYT11Q9BT88 431 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 TMEM121BQ9BXQ6 578 aaPredicted RBP19.27■□□□□ 0.68
CLN6-221ENST00000637494 CALN1Q9BXU9 219 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 MRPL47Q9HD33 250 aaKnown RBP19.27■□□□□ 0.68
CLN6-221ENST00000637494 AP4E1Q9UPM8 1137 aa19.27■□□□□ 0.68
CLN6-221ENST00000637494 C16orf96A6NNT2 1141 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 A6NNZ2 444 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 RASA4BC9J798 803 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 EEF2KO00418 725 aaKnown RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 RASA4O43374 803 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 TSPAN6O43657 245 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 PRPSAP2O60256 369 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 TMCC1O94876 653 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 MYBL1P10243 752 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 NR1I3Q14994 352 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 INO80DQ53TQ3 878 aaPredicted RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 ERMARDQ5T6L9 678 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 ZNF571Q7Z3V5 609 aaPredicted RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 SPATS2Q86XZ4 545 aaKnown RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 DCP2Q8IU60 420 aaKnown RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 UMODL1-AS1Q8N2C9 162 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 TMEM145Q8NBT3 493 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 OR6K2Q8NGY2 324 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 ZNF653Q96CK0 615 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 SLC17A9Q9BYT1 436 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 TOR4AQ9NXH8 423 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 CNOT8Q9UFF9 292 aaKnown RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 ZFR2Q9UPR6 939 aaKnown RBP19.26■□□□□ 0.67
CLN6-221ENST00000637494 FADS3Q9Y5Q0 445 aa19.26■□□□□ 0.67
CLN6-221ENST00000637494 ATMINO43313 823 aaPredicted RBP19.25■□□□□ 0.67
CLN6-221ENST00000637494 UGT2B4P06133 528 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 BNIP3Q12983 259 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 SERINC3Q13530 473 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 SHBQ15464 509 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 TMEM259Q4ZIN3 620 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 TDRD12Q587J7 1177 aaKnown RBP19.25■□□□□ 0.67
CLN6-221ENST00000637494 FIGNQ5HY92 759 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 SEL1L3Q68CR1 1132 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 GDPD4Q6W3E5 623 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 CCNI2Q6ZMN8 369 aaPredicted RBP19.25■□□□□ 0.67
CLN6-221ENST00000637494 TMPRSS7Q7RTY8 843 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 IQCDQ96DY2 449 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 HMCESQ96FZ2 354 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 FUCA2Q9BTY2 467 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 TTYH3Q9C0H2 523 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 DHX35Q9H5Z1 703 aaKnown RBP19.25■□□□□ 0.67
CLN6-221ENST00000637494 CBX8Q9HC52 389 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 FZD3Q9NPG1 666 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 CA5BQ9Y2D0 317 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 PCDHGA1Q9Y5H4 931 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 HS3ST3A1Q9Y663 406 aa19.25■□□□□ 0.67
CLN6-221ENST00000637494 BZW2Q9Y6E2 419 aaKnown RBP19.25■□□□□ 0.67
CLN6-221ENST00000637494 TMEM191CA6NGB0 347 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 ARHGAP42A6NI28 874 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 RNF103O00237 685 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 DKK1O94907 266 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 C1SP09871 688 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 XPAP23025 273 aaPredicted RBP19.24■□□□□ 0.67
CLN6-221ENST00000637494 ZNF135P52742 658 aaPredicted RBP19.24■□□□□ 0.67
CLN6-221ENST00000637494 NDST2P52849 883 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 UBASH3AP57075 661 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 FANCCQ00597 558 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 OGDHQ02218 1023 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 ATXN7L2Q5T6C5 722 aaPredicted RBP19.24■□□□□ 0.67
CLN6-221ENST00000637494 PTAR1Q7Z6K3 402 aaPredicted RBP19.24■□□□□ 0.67
CLN6-221ENST00000637494 FNIP1Q8TF40 1166 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 KLHL32Q96NJ5 620 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLN6-221ENST00000637494 KLHL11Q9NVR0 708 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 MYO1AQ9UBC5 1043 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 UBA2Q9UBT2 640 aaPredicted RBP19.24■□□□□ 0.67
CLN6-221ENST00000637494 PCSK1NQ9UHG2 260 aa19.24■□□□□ 0.67
CLN6-221ENST00000637494 IPO11Q9UI26 975 aaKnown RBP19.24■□□□□ 0.67
CLN6-221ENST00000637494 COL5A1P20908 1838 aaPredicted RBP19.23■□□□□ 0.67
CLN6-221ENST00000637494 CHD8Q9HCK8 2581 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 FPGTO14772 594 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 RFPL3O75679 317 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 PAK4O96013 591 aaPredicted RBP19.23■□□□□ 0.67
CLN6-221ENST00000637494 SKILP12757 684 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 GKP32189 559 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 GRM3Q14832 879 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 TTC7BQ86TV6 843 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 LUZP1Q86V48 1076 aa19.23■□□□□ 0.67
CLN6-221ENST00000637494 PSTKQ8IV42 348 aaKnown RBP19.23■□□□□ 0.67
CLN6-221ENST00000637494 OR13H1Q8NG92 308 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms