RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 TWNKQ96RR1 684 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 NMUR2Q9GZQ4 415 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 RMND5AQ9H871 391 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 SAR1AQ9NR31 198 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 C6orf203Q9P0P8 240 aaPredicted RBP14.35□□□□□ -0.11
GABRB3-219ENST00000636466 OPTCQ9UBM4 332 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 LMO7Q8WWI1 1683 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 F7P08709 466 aaPredicted RBP14.35□□□□□ -0.11
GABRB3-219ENST00000636466 PBX3P40426 434 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 HNF4AP41235 474 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 PLCL1Q15111 1095 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 PPM1LQ5SGD2 360 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 MFSD4BQ5TF39 518 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 LRRC8BQ6P9F7 803 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 BHLHE22Q8NFJ8 381 aaPredicted RBP14.35□□□□□ -0.11
GABRB3-219ENST00000636466 MCOLN3Q8TDD5 553 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 AZIN2Q96A70 460 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 KCTD15Q96SI1 283 aaPredicted RBP14.35□□□□□ -0.11
GABRB3-219ENST00000636466 VTI1BQ9UEU0 232 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 ITM2BQ9Y287 266 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 TELO2Q9Y4R8 837 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 TULP2O00295 520 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 CCT8P50990 548 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 INHBEP58166 350 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 ZBTB17Q13105 803 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 SCARA3Q6AZY7 606 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 TPD52L3Q96J77 140 aa14.35□□□□□ -0.11
GABRB3-219ENST00000636466 A8MUI8 341 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 LRIG2O94898 1065 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 PSMG1O95456 288 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 ATP5F1P24539 256 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 ICAM3P32942 547 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 IL5RAQ01344 420 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 STAG3L4Q8TBR4 150 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 PCED1BQ96HM7 432 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 TMPRSS4Q9NRS4 437 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 GIMAP4Q9NUV9 329 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 H2AFY2Q9P0M6 372 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 PTCH2Q9Y6C5 1203 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 FAM208AQ9UK61 1670 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 TBC1D3BA6NDS4 549 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 ZNF839A8K0R7 811 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 TMEM114B3SHH9 223 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 HDAC3O15379 428 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 MSCO60682 206 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 DAB1O75553 588 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 MLNP12872 115 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 CDK18Q07002 472 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 CPSF6Q16630 551 aaKnown RBP eCLIP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 TEX44Q53QW1 395 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 ZNF697Q5TEC3 545 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 VWA5B1Q5TIE3 1220 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 ARMC6Q6NXE6 501 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 TRMT10BQ6PF06 316 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 CIR1Q86X95 450 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 FBXO30Q8TB52 745 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 DQX1Q8TE96 717 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 NKD2Q969F2 451 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 DDX18Q9NVP1 670 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 GMIPQ9P107 970 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 GIT1Q9Y2X7 761 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 KIAA0100Q14667 2235 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 CLOCKO15516 846 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 MAN1A2O60476 641 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RNASEH1O60930 286 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 CYP7B1O75881 506 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 DDX5P17844 614 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 SERPINA4P29622 427 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RPL9P32969 192 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 GRIA3P42263 894 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RAB10P61026 200 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 IRX1P78414 480 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 NEDD8Q15843 81 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 AP5B1Q2VPB7 878 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 DCLRE1AQ6PJP8 1040 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 STRADAQ7RTN6 431 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 NAT16Q8N8M0 369 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 BTN2A2Q8WVV5 523 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RCN3Q96D15 328 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 SH3GL2Q99962 352 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 SLC25A23Q9BV35 468 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 ARHGEF4Q9NR80 690 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 MRPL17Q9NRX2 175 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 YJEFN3A6XGL0 299 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 C9JVG2 144 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 E7ENQ6 273 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 APOA1P02647 267 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 HGFP14210 728 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
GABRB3-219ENST00000636466 SERPINB10P48595 397 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 KCNA10Q16322 511 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 STXBP5Q5T5C0 1151 aa14.34□□□□□ -0.11
GABRB3-219ENST00000636466 RHBDF2Q6PJF5 856 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms