RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SEMA4FO95754 770 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 CCDC175P0C221 793 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 TGM1P22735 817 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 GKP32189 559 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 GARSP41250 739 aaKnown RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 CSNK1DP48730 415 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF33AQ06730 810 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 NSUN2Q08J23 767 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 SLC10A7Q0GE19 358 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 LBRQ14739 615 aaKnown RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 POM121L1PQ3SYA9 428 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 TFDP3Q5H9I0 405 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 PLA2G2CQ5R387 149 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 PIP5KL1Q5T9C9 394 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 SPOCD1Q6ZMY3 1216 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 SYCE1Q8N0S2 351 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 RYBPQ8N488 228 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 ATPAF2Q8N5M1 289 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 TSEN2Q8NCE0 465 aaKnown RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 OR6K2Q8NGY2 324 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 GRIN3AQ8TCU5 1115 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 FOXJ1Q92949 421 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 FATE1Q969F0 183 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 ARRDC3Q96B67 414 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 PSKH2Q96QS6 385 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 HDAC8Q9BY41 377 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 CPEB1Q9BZB8 566 aaKnown RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 TSGA10Q9BZW7 698 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 ARRDC1-AS1Q9H2J1 176 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 C6orf106Q9H6K1 298 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 GUCA1BQ9UMX6 200 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 ZKSCAN5Q9Y2L8 839 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 FRYLO94915 3013 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 SHROOM3Q8TF72 1996 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 RALGAPA1Q6GYQ0 2036 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 MUSKO15146 869 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 INSIG1O15503 277 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 LRP3O75074 770 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 MAP3K6O95382 1288 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 IGSF6O95976 241 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 KRT10P13645 584 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ZFXP17010 805 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-210ENST00000635675 MX2P20592 715 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ITPKAP23677 461 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 CCNCP24863 283 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ITGB7P26010 798 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 RGRP47804 291 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ADPRHP54922 357 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 TAS2R38P59533 333 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 CREB5Q02930 508 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 RAD51Q06609 339 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ADCY2Q08462 1091 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 AGBL4Q5VU57 503 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 LYSMD4Q5XG99 296 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ARMCX6Q7L4S7 300 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 PEX26Q7Z412 305 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 RFX6Q8HWS3 928 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 TEX26Q8N6G2 289 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-210ENST00000635675 DNASE2BQ8WZ79 361 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 MAML1Q92585 1016 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ALG3Q92685 438 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 RBM41Q96IZ5 413 aaKnown RBP9.87□□□□□ -0.83
LINC00339-210ENST00000635675 EXOC2Q96KP1 924 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 HSPA12BQ96MM6 686 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 ZDHHC6Q9H6R6 413 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 PARD6AQ9NPB6 346 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 TMEM74BQ9NUR3 256 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
LINC00339-210ENST00000635675 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 EVLQ9UI08 416 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-210ENST00000635675 PILRBQ9UKJ0 227 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 AMFRQ9UKV5 643 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 HEY1Q9Y5J3 304 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 CAPN6Q9Y6Q1 641 aa9.87□□□□□ -0.83
LINC00339-210ENST00000635675 USP34Q70CQ2 3546 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 hCG_1818297A0A087WSY0 165 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 LRRC72A6NJI9 287 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 MIF4GDA9UHW6 222 aaKnown RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 MATN3O15232 486 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 PLRG1O43660 514 aaKnown RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 CST8O60676 142 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 FTCDO95954 541 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 UGT2B4P06133 528 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 IGHV4-34P06331 123 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 HSPA9P38646 679 aaKnown RBP9.86□□□□□ -0.83
LINC00339-210ENST00000635675 MPLP40238 635 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 NR2C2P49116 596 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 RENBPP51606 427 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 RWDD2BP57060 319 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 COPS2P61201 443 aa9.86□□□□□ -0.83
LINC00339-210ENST00000635675 DYNLT1P63172 113 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms