RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 CTCFP49711 727 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 VPS41P49754 854 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 ADPRHP54922 357 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 DCTN2Q13561 401 aaKnown RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 KCNB1Q14721 858 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 WTAPQ15007 396 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 FAM133BQ5BKY9 247 aaKnown RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 RNASE12Q5GAN4 147 aaKnown RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 SPDYAQ5MJ70 313 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 MTFR2Q6P444 385 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 TMEM65Q6PI78 240 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 DCDC5Q6ZRR9 648 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 MRGPREQ86SM8 312 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 MON1AQ86VX9 555 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 TMEM200AQ86VY9 491 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 VPS52Q8N1B4 723 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 SLC44A3Q8N4M1 653 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 C11orf65Q8NCR3 313 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 CREB3L4Q8TEY5 395 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 POMGNT1Q8WZA1 660 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 USP6NLQ92738 828 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 CAVIN3Q969G5 261 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 MMS19Q96T76 1030 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 C1QTNF3Q9BXJ4 246 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 CADM1Q9BY67 442 aaKnown RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 EPHX3Q9H6B9 360 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 PRKRIP1Q9H875 184 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 TLR8Q9NR97 1041 aaKnown RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 ASNSD1Q9NWL6 643 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 IL1RAPL1Q9NZN1 696 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 BCCIPQ9P287 314 aaKnown RBP eCLIP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 PKD1L3Q7Z443 1732 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 NSD2O96028 1365 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 ARFGEF1Q9Y6D6 1849 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 NSD3Q9BZ95 1437 aa5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 BRCA1P38398 1863 aaKnown RBP5.39□□□□□ -1.55
TRAPPC9-216ENST00000634178 C5P01031 1676 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 FAM208AQ9UK61 1670 aaKnown RBP5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 KIAA1551Q9HCM1 1747 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 A0A0G2JLL6 359 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 TEX13CA0A0J9YWL9 993 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 PER2O15055 1255 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 TNFSF14O43557 240 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 CNTN5O94779 1100 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 URODP06132 367 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 ADH4P08319 380 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 LYL1P12980 280 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 CDH2P19022 906 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 FPR3P25089 353 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 MTNR1AP48039 350 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 SHC2P98077 582 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 EFNB1P98172 346 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 B4GALNT1Q00973 533 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 GOLGA8DPQ0D2H9 430 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 CHAF1BQ13112 559 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 BCDIN3DQ7Z5W3 292 aaKnown RBP5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 GRASPQ7Z6J2 395 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 ADGRF3Q8IZF5 1079 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 KLHL29Q96CT2 875 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 KAZALD1Q96I82 304 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 GPR78Q96P69 363 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 MPHOSPH8Q99549 860 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 HDHD5Q9BXW7 423 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 SMYD2Q9NRG4 433 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 HCFC1R1Q9NWW0 138 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 EHD2Q9NZN4 543 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 TBC1D29Q9UFV1 150 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 DHDHQ9UQ10 334 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 PKP3Q9Y446 797 aa5.38□□□□□ -1.55
TRAPPC9-216ENST00000634178 UBR3Q6ZT12 1888 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 NPIPB15A6NHN6 443 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 LINC00473A8K010 186 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 PRYO14603 147 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 PLOD3O60568 738 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 EXOC3O60645 756 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 USP12O75317 370 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 GCATO75600 419 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 PDE8BO95263 885 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 ITPKBP27987 946 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 SKIV2L2P42285 1042 aaKnown RBP5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 CPA2P48052 419 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 SOX10P56693 466 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 TGFB2P61812 414 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 CALD1Q05682 793 aaKnown RBP5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 DMWDQ09019 674 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 IL13RA2Q14627 380 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 LARS2Q15031 903 aaKnown RBP5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 SLC18A3Q16572 532 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 SH2D4BQ5SQS7 431 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 CEP85Q6P2H3 762 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 TMCO3Q6UWJ1 677 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 TRIM72Q6ZMU5 477 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 GALNT5Q7Z7M9 940 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 UEVLDQ8IX04 471 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 ULK2Q8IYT8 1036 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 TMTC2Q8N394 836 aa5.37□□□□□ -1.55
TRAPPC9-216ENST00000634178 KCNG4Q8TDN1 519 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms