RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CCDC150Q8NCX0 1101 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 SCG3Q8WXD2 468 aaKnown RBP14.16□□□□□ -0.14
SNX1-214ENST00000625244 DHX58Q96C10 678 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 PRMT1Q99873 361 aaKnown RBP14.16□□□□□ -0.14
SNX1-214ENST00000625244 C1QTNF2Q9BXJ5 285 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 VPS28Q9UK41 221 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 HS3ST2Q9Y278 367 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 TCAF2A6NFQ2 919 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 SMAD6O43541 496 aaKnown RBP14.15□□□□□ -0.14
SNX1-214ENST00000625244 LEFTY1O75610 366 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 SETSIPP0DME0 302 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 ADRB3P13945 408 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 RRM1P23921 792 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 RECQLP46063 649 aaPredicted RBP14.15□□□□□ -0.14
SNX1-214ENST00000625244 IRAK1P51617 712 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 NEK3P51956 506 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 PPARDQ03181 441 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 CENPCQ03188 943 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 DEFB109BQ30KR1 87 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 LVRNQ6Q4G3 990 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 SPRED1Q7Z699 444 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 CACNA2D3Q8IZS8 1091 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 FSTL5Q8N475 847 aaPredicted RBP14.15□□□□□ -0.14
SNX1-214ENST00000625244 ATP11CQ8NB49 1132 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 OR6C4Q8NGE1 309 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 APOBEC4Q8WW27 367 aaKnown RBP14.15□□□□□ -0.14
SNX1-214ENST00000625244 EEF2KMTQ96G04 330 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 SLC45A3Q96JT2 553 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 KCTD10Q9H3F6 313 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 CUEDC2Q9H467 287 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 IL36AQ9UHA7 158 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 APPL1Q9UKG1 709 aa14.15□□□□□ -0.14
SNX1-214ENST00000625244 WIPF3A6NGB9 483 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 M0QYT0 321 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 O00370 1275 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 SNAP91O60641 907 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 APOEP02649 317 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 FGF3P11487 239 aaPredicted RBP14.14□□□□□ -0.15
SNX1-214ENST00000625244 CD19P15391 556 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 GRNP28799 593 aaKnown RBP14.14□□□□□ -0.15
SNX1-214ENST00000625244 OAS2P29728 719 aaKnown RBP14.14□□□□□ -0.15
SNX1-214ENST00000625244 CDC20Q12834 499 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 ELOCQ15369 112 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 ARHGAP44Q17R89 818 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 EFHC2Q5JST6 749 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 SYPL2Q5VXT5 272 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 DPY19L3Q6ZPD9 716 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 FAM114A1Q8IWE2 563 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 DENND6BQ8NEG7 585 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 SLC35F5Q8WV83 523 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 CENPTQ96BT3 561 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 PPP1R16AQ96I34 528 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 BTN2A3PQ96KV6 586 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 CCDC114Q96M63 670 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 TAAR9Q96RI9 348 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 PPP1R9BQ96SB3 815 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 EDEM3Q9BZQ6 932 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 MIS12Q9H081 205 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 TNKS2Q9H2K2 1166 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 PRDM8Q9NQV8 689 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 GGT7Q9UJ14 662 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 PCDHGA3Q9Y5H0 932 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 WASF2Q9Y6W5 498 aa14.14□□□□□ -0.15
SNX1-214ENST00000625244 TACC2O95359 2948 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 EFCAB7A8K855 629 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 AP1G1O43747 822 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 RAD1O60671 282 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 DDAH2O95865 285 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 ALPIP09923 528 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 PDIA4P13667 645 aaKnown RBP14.13□□□□□ -0.15
SNX1-214ENST00000625244 IGFALSP35858 605 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 EIF4A3P38919 411 aaKnown RBP14.13□□□□□ -0.15
SNX1-214ENST00000625244 ANP32AP39687 249 aaKnown RBP14.13□□□□□ -0.15
SNX1-214ENST00000625244 HK3P52790 923 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 STK4Q13043 487 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 RABGAP1LQ5R372 815 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 TTC39BQ5VTQ0 682 aaPredicted RBP14.13□□□□□ -0.15
SNX1-214ENST00000625244 FBXL22Q6P050 247 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 MACC1Q6ZN28 852 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 NYAP1Q6ZVC0 841 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 PARS2Q7L3T8 475 aaKnown RBP14.13□□□□□ -0.15
SNX1-214ENST00000625244 SFTPA2Q8IWL1 248 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 KIAA0895Q8NCT3 520 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 RCBTB1Q8NDN9 531 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 GPR156Q8NFN8 814 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 ASB12Q8WXK4 309 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 TSACCQ96A04 125 aaPredicted RBP14.13□□□□□ -0.15
SNX1-214ENST00000625244 FAXDC2Q96IV6 333 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 PSMB7Q99436 277 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 RDH14Q9HBH5 336 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 TMEM8AQ9HCN3 771 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 CASS4Q9NQ75 786 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 B3GALT1Q9Y5Z6 326 aa14.13□□□□□ -0.15
SNX1-214ENST00000625244 KCNU1A8MYU2 1149 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 CAPN5O15484 640 aaPredicted RBP14.12□□□□□ -0.15
SNX1-214ENST00000625244 ENDOD1O94919 500 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms