RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
SIRPA-204ENST00000622179 RAP2CQ9Y3L5 183 aa13.42□□□□□ -0.26
SIRPA-204ENST00000622179 USP1O94782 785 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 ATP5F1P24539 256 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 ITGA7Q13683 1181 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 GALNT3Q14435 633 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 DENND6AQ8IWF6 608 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 NXNL1Q96CM4 212 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 ADGRE3Q9BY15 652 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 WDR41Q9HAD4 459 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 WWOXQ9NZC7 414 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 UBA2Q9UBT2 640 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 GOLGA4Q13439 2230 aaKnown RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 PFDN1O60925 122 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 KATNA1O75449 491 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 PROZP22891 400 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 BRMS1LQ5PSV4 323 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 POTEHQ6S545 545 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 TSPAN18Q96SJ8 248 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 CLPBQ9H078 707 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 SMCHD1A6NHR9 2005 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 BTN3A1O00481 513 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 MRASO14807 208 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 TYROBPO43914 113 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 CNMDO75829 334 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 ATP5C1P36542 298 aaKnown RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 LIMK2P53671 638 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 PRKAA2P54646 552 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 INHBEP58166 350 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 TAF10Q12962 218 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 NFYCQ13952 458 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 NET1Q7Z628 596 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 CAND1Q86VP6 1230 aaKnown RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 OR6Y1Q8NGX8 325 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 ABTB1Q969K4 478 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 HAUS8Q9BT25 410 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 CDH19Q9H159 772 aa13.41□□□□□ -0.26
SIRPA-204ENST00000622179 SEMA4BQ9NPR2 832 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-204ENST00000622179 TLR5O60602 858 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SIN3BO75182 1162 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ANPEPP15144 967 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ARFGAP1Q8N6T3 406 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 RCN3Q96D15 328 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 BPIFA1Q9NP55 256 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 GMIPQ9P107 970 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 CABYRO75952 493 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 F2P00734 622 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 MYL4P12829 197 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 CHRNA4P43681 627 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 DUSP4Q13115 394 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 DENND1CQ8IV53 801 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 CLEC4FQ8N1N0 589 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ZNF781Q8N8C0 355 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SIGLEC10Q96LC7 697 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ACBD6Q9BR61 282 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 THUMPD3Q9BV44 507 aaKnown RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 APPL1Q9UKG1 709 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 A0A087X1B8 175 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ARHGAP10A1A4S6 786 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 E9PAM4 449 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 KPNA1P52294 538 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ARL13AQ5H913 290 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 THEMIS2Q5TEJ8 643 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 UROC1Q96N76 676 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SEMA6AQ9H2E6 1030 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SEPT3Q9UH03 358 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 RGSL1A5PLK6 1076 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 PSMD12O00232 456 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 CLASP2O75122 1294 aaKnown RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 BEST1O76090 585 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ARHGEF7Q14155 803 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 GRB14Q14449 540 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 MFN1Q8IWA4 741 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 PTGR2Q8N8N7 351 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 TEKT5Q96M29 485 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 CCT7Q99832 543 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 NMRK2Q9NPI5 230 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 CATSPERZQ9NTU4 200 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
SIRPA-204ENST00000622179 NMRK1Q9NWW6 199 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 RAD54BQ9Y620 910 aa13.4□□□□□ -0.26
SIRPA-204ENST00000622179 SYCE1LA8MT33 242 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 HOXA11P31270 313 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 INSCQ1MX18 579 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PPP1R15BQ5SWA1 713 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms