RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 SNRPD1P62314 119 aaKnown RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 NSUN2Q08J23 767 aaKnown RBP eCLIP20■□□□□ 0.79
UPF3A-211ENST00000618700 ATXN7L2Q5T6C5 722 aaPredicted RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 HEATR6Q6AI08 1181 aaKnown RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 DRICH1Q6PGQ1 229 aaPredicted RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 DARS2Q6PI48 645 aaKnown RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 C1orf210Q8IVY1 113 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 MAML2Q8IZL2 1156 aaPredicted RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 BBS5Q8N3I7 341 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 CNTD1Q8N815 330 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 CHST14Q8NCH0 376 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 OR8D1Q8WZ84 308 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 ERLEC1Q96DZ1 483 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 HHIPQ96QV1 700 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 MKRN2Q9H000 416 aaKnown RBP20■□□□□ 0.79
UPF3A-211ENST00000618700 USP29Q9HBJ7 922 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 NT5MQ9NPB1 228 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 RBM22Q9NW64 420 aaKnown RBP eCLIP20■□□□□ 0.792e-10■■■■■ 44.4
UPF3A-211ENST00000618700 ATP8A1Q9Y2Q0 1164 aa20■□□□□ 0.79
UPF3A-211ENST00000618700 BNIP3LO60238 219 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 CTSLP07711 333 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 GABRG2P18507 467 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 NDUFV2P19404 249 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 HOXA6P31267 233 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 RECQLP46063 649 aaPredicted RBP19.99■□□□□ 0.79
UPF3A-211ENST00000618700 BYSLQ13895 437 aaKnown RBP19.99■□□□□ 0.79
UPF3A-211ENST00000618700 DSG2Q14126 1118 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 TEX44Q53QW1 395 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 RASSF3Q86WH2 238 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 CAMKK1Q8N5S9 505 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 TSTD1Q8NFU3 115 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 HOMER3Q9NSC5 361 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 SEPT10Q9P0V9 454 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 HECAQ9UBI9 543 aaPredicted RBP19.99■□□□□ 0.79
UPF3A-211ENST00000618700 RAPGEFL1Q9UHV5 662 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 HCN4Q9Y3Q4 1203 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 CACNA1IQ9P0X4 2223 aa19.99■□□□□ 0.79
UPF3A-211ENST00000618700 RNF103O00237 685 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 LAMTOR5O43504 91 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 GJB3O75712 270 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 APBB3O95704 486 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 CHRNA3P32297 505 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 FOXK1P85037 733 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 CYP1B1Q16678 543 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 MYLK3Q32MK0 819 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 ZNF776Q68DI1 518 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-211ENST00000618700 C12orf50Q8NA57 414 aaPredicted RBP19.98■□□□□ 0.79
UPF3A-211ENST00000618700 MDGA1Q8NFP4 955 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 OR6K2Q8NGY2 324 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 CAPZA3Q96KX2 299 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 MRGPRX1Q96LB2 322 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 NUDCD1Q96RS6 583 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 VAT1Q99536 393 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 HEPHQ9BQS7 1158 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 AP1M1Q9BXS5 423 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 CEP41Q9BYV8 373 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 HAUS2Q9NVX0 235 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 RNF14Q9UBS8 474 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 WASF2Q9Y6W5 498 aa19.98■□□□□ 0.79
UPF3A-211ENST00000618700 CFAP69A5D8W1 941 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 PDE2AO00408 941 aaPredicted RBP19.97■□□□□ 0.79
UPF3A-211ENST00000618700 KCNN4O15554 427 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 ALDH1A2O94788 518 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 POP4O95707 220 aaKnown RBP19.97■□□□□ 0.79
UPF3A-211ENST00000618700 ITGAVP06756 1048 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 MAPK8P45983 427 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 NRLP54845 237 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 MAXP61244 160 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 RPS14P62263 151 aaKnown RBP19.97■□□□□ 0.79
UPF3A-211ENST00000618700 RALGPS1Q5JS13 557 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 FAM182AQ5T1J6 154 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 DSG4Q86SJ6 1040 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 TMPRSS6Q8IU80 811 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 ZNF567Q8N184 647 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 HMGB4Q8WW32 186 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 RTP4Q96DX8 246 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 TEKT5Q96M29 485 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 NSMCE3Q96MG7 304 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 FERMT1Q9BQL6 677 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 TMEM121Q9BTD3 319 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 POLR1EQ9GZS1 481 aaKnown RBP19.97■□□□□ 0.79
UPF3A-211ENST00000618700 SLC6A17Q9H1V8 727 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 IL36AQ9UHA7 158 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 EVLQ9UI08 416 aaPredicted RBP19.97■□□□□ 0.79
UPF3A-211ENST00000618700 TRHDEQ9UKU6 1024 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 PPM1HQ9ULR3 514 aa19.97■□□□□ 0.79
UPF3A-211ENST00000618700 KRIT1O00522 736 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 INSIG1O15503 277 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 RNASEH1O60930 286 aaKnown RBP19.96■□□□□ 0.79
UPF3A-211ENST00000618700 LEFTY1O75610 366 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 NEBLO76041 1014 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 PRNPP04156 253 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 GKP32189 559 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 GDF10P55107 478 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 AP1S1P61966 158 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 ZBTB16Q05516 673 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 SNX1Q13596 522 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 CST6Q15828 149 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 ANO7Q6IWH7 933 aa19.96■□□□□ 0.79
UPF3A-211ENST00000618700 NCEH1Q6PIU2 408 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms