RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
UBXN1-218ENST00000616865 SCUBE2Q9NQ36 999 aa15.18■□□□□ 0.02
UBXN1-218ENST00000616865 PRSS16Q9NQE7 514 aa15.18■□□□□ 0.02
UBXN1-218ENST00000616865 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
UBXN1-218ENST00000616865 ANKRD6Q9Y2G4 727 aa15.18■□□□□ 0.02
UBXN1-218ENST00000616865 GOLGA8CPA6NN73 597 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 FAM72CH0Y354 149 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 FGF10O15520 208 aaPredicted RBP15.17■□□□□ 0.02
UBXN1-218ENST00000616865 LRIG2O94898 1065 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 DNTTP04053 509 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 CD27P26842 260 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 GRK6P43250 576 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 MARCKSL1P49006 195 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 SGSHP51688 502 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 RPS24P62847 133 aaKnown RBP15.17■□□□□ 0.02
UBXN1-218ENST00000616865 TTC31Q49AM3 519 aaPredicted RBP15.17■□□□□ 0.02
UBXN1-218ENST00000616865 FAM72AQ5TYM5 149 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 MBLAC2Q68D91 279 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 FAM72DQ6L9T8 149 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 FAM72BQ86X60 149 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 CARNMT1Q8N4J0 409 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 EXD1Q8NHP7 514 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.17■□□□□ 0.02
UBXN1-218ENST00000616865 RAPGEF5Q92565 580 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 IGSF8Q969P0 613 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 HES6Q96HZ4 224 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 DONSONQ9NYP3 566 aa15.17■□□□□ 0.02
UBXN1-218ENST00000616865 RCOR3Q9P2K3 495 aaPredicted RBP15.17■□□□□ 0.02
UBXN1-218ENST00000616865 PPARGC1AQ9UBK2 798 aaKnown RBP15.17■□□□□ 0.02
UBXN1-218ENST00000616865 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 A0A1B0GVM2 712 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 CTAGE9A4FU28 777 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 TCAF2A6NFQ2 919 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 KCNK3O14649 394 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ENC1O14682 589 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 TNFSF14O43557 240 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 PCDHGA12O60330 932 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 FSBPO95073 299 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ATP5BP06576 529 aaKnown RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 DLDP09622 509 aaKnown RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 GOT1P17174 413 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 CASQ1P31415 396 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ZNF177Q13360 481 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 CDH18Q13634 790 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 DPYSL3Q14195 570 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 SEL1L2Q5TEA6 688 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ZNF776Q68DI1 518 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 RFX8Q6ZV50 586 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 CIR1Q86X95 450 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 MARCH9Q86YJ5 346 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 RFX6Q8HWS3 928 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 WFDC5Q8TCV5 224 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 HNRNPLLQ8WVV9 542 aaKnown RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 C16orf45Q96MC5 204 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 PRICKLE1Q96MT3 831 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 NAPGQ99747 312 aaPredicted RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ORAI3Q9BRQ5 295 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 ZNF670Q9BS34 389 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 SGK2Q9HBY8 427 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 MPP6Q9NZW5 540 aa15.16■□□□□ 0.02
UBXN1-218ENST00000616865 CWC15Q9P013 229 aaKnown RBP15.16■□□□□ 0.02
UBXN1-218ENST00000616865 IGLV3-10A0A075B6K4 115 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 DRGXA6NNA5 263 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 H0Y8X5 98 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 DDX3YO15523 660 aaKnown RBP15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CLDN11O75508 207 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CD48P09326 243 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 RHOQP17081 205 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CD70P32970 193 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CTSKP43235 329 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 HCAR3P49019 387 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 PEX5P50542 639 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CDH4P55283 916 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 COPS2P61201 443 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 MMRN1Q13201 1228 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CAMK2BQ13554 666 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 MPP7Q5T2T1 576 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CCDC181Q5TID7 509 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 MANEALQ5VSG8 457 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 KAZNQ674X7 775 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 TFAP2DQ7Z6R9 452 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 ADAT2Q7Z6V5 191 aaKnown RBP15.15■□□□□ 0.02
UBXN1-218ENST00000616865 MFN1Q8IWA4 741 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 MYEOVQ96EZ4 313 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 MYO19Q96H55 970 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 CSPG4P5Q96PW8 444 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 PSMB7Q99436 277 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 DNAI1Q9UI46 699 aa15.15■□□□□ 0.02
UBXN1-218ENST00000616865 FAM149AA5PLN7 773 aa15.14■□□□□ 0.01
UBXN1-218ENST00000616865 TRABD2BA6NFA1 517 aa15.14■□□□□ 0.01
UBXN1-218ENST00000616865 KIF2AO00139 706 aaPredicted RBP15.14■□□□□ 0.01
UBXN1-218ENST00000616865 CNTN5O94779 1100 aa15.14■□□□□ 0.01
UBXN1-218ENST00000616865 IGHV4-34P06331 123 aa15.14■□□□□ 0.01
UBXN1-218ENST00000616865 ZFXP17010 805 aaPredicted RBP15.14■□□□□ 0.01
UBXN1-218ENST00000616865 POLR2EP19388 210 aaKnown RBP15.14■□□□□ 0.01
UBXN1-218ENST00000616865 AMPD1P23109 780 aa15.14■□□□□ 0.01
UBXN1-218ENST00000616865 OR1E1P30953 314 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms